RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 SLIT1O75093 1534 aa11.29□□□□□ -0.6
CBWD1-228ENST00000619157 FAM229AH3BQW9 127 aa11.28□□□□□ -0.6
CBWD1-228ENST00000619157 EFSO43281 561 aa11.28□□□□□ -0.6
CBWD1-228ENST00000619157 LTKP29376 864 aa11.28□□□□□ -0.6
CBWD1-228ENST00000619157 ADGRB3O60242 1522 aa11.27□□□□□ -0.61
CBWD1-228ENST00000619157 ELOA3CA0A087WX78 387 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-228ENST00000619157 ELOA3DA6NLF2 546 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-228ENST00000619157 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
CBWD1-228ENST00000619157 RSPO4Q2I0M5 234 aaPredicted RBP11.27□□□□□ -0.61
CBWD1-228ENST00000619157 ELOA3BQ3SY89 546 aa11.27□□□□□ -0.61
CBWD1-228ENST00000619157 ELOA3Q8NG57 546 aa11.27□□□□□ -0.61
CBWD1-228ENST00000619157 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
CBWD1-228ENST00000619157 SAMD5Q5TGI4 173 aa11.26□□□□□ -0.61
CBWD1-228ENST00000619157 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
CBWD1-228ENST00000619157 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CBWD1-228ENST00000619157 TMEM2Q9UHN6 1383 aa11.26□□□□□ -0.61
CBWD1-228ENST00000619157 KDM5AP29375 1690 aaKnown RBP11.25□□□□□ -0.61
CBWD1-228ENST00000619157 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.25□□□□□ -0.61
CBWD1-228ENST00000619157 SEMA3FQ13275 785 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
CBWD1-228ENST00000619157 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
CBWD1-228ENST00000619157 LRRC69Q6ZNQ3 347 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 ZDHHC1Q8WTX9 485 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 KRTAP9-2Q9BYQ4 174 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
CBWD1-228ENST00000619157 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
CBWD1-228ENST00000619157 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
CBWD1-228ENST00000619157 ALAS2P22557 587 aa11.24□□□□□ -0.61
CBWD1-228ENST00000619157 PRRT3Q5FWE3 981 aa11.24□□□□□ -0.61
CBWD1-228ENST00000619157 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
CBWD1-228ENST00000619157 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
CBWD1-228ENST00000619157 TBCELQ5QJ74 424 aa11.23□□□□□ -0.61
CBWD1-228ENST00000619157 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
CBWD1-228ENST00000619157 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
CBWD1-228ENST00000619157 ZFYVE9O95405 1425 aa11.23□□□□□ -0.61
CBWD1-228ENST00000619157 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
CBWD1-228ENST00000619157 M0R082 166 aa11.22□□□□□ -0.61
CBWD1-228ENST00000619157 APBA3O96018 575 aa11.22□□□□□ -0.61
CBWD1-228ENST00000619157 TXNDC2Q86VQ3 553 aa11.22□□□□□ -0.61
CBWD1-228ENST00000619157 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
CBWD1-228ENST00000619157 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
CBWD1-228ENST00000619157 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
CBWD1-228ENST00000619157 MDFIQ99750 246 aa11.22□□□□□ -0.61
CBWD1-228ENST00000619157 MYO5BQ9ULV0 1848 aa11.21□□□□□ -0.61
CBWD1-228ENST00000619157 SPDYE3A6NKU9 549 aa11.21□□□□□ -0.61
CBWD1-228ENST00000619157 PSME1Q06323 249 aa11.21□□□□□ -0.61
CBWD1-228ENST00000619157 NKAPLQ5M9Q1 402 aa11.21□□□□□ -0.61
CBWD1-228ENST00000619157 RAB44Q7Z6P3 723 aaPredicted RBP11.21□□□□□ -0.61
CBWD1-228ENST00000619157 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
CBWD1-228ENST00000619157 SLC30A3Q99726 388 aa11.21□□□□□ -0.61
CBWD1-228ENST00000619157 SCHIP1Q9P0W5 487 aaPredicted RBP11.21□□□□□ -0.61
CBWD1-228ENST00000619157 KRTAP9-6A0A140TA67 174 aa11.2□□□□□ -0.62
CBWD1-228ENST00000619157 SFSWAPQ12872 951 aaKnown RBP11.2□□□□□ -0.62
CBWD1-228ENST00000619157 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
CBWD1-228ENST00000619157 SPHKAPQ2M3C7 1700 aa11.2□□□□□ -0.62
CBWD1-228ENST00000619157 ALBP02768 609 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 GTF2IP78347 998 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 EML3Q32P44 896 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 SH3PXD2AQ5TCZ1 1133 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 ZNF232Q9UNY5 417 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 STARD13Q9Y3M8 1113 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 CLTCL1P53675 1640 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 TRPM2O94759 1503 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 IQSEC2Q5JU85 1478 aa11.19□□□□□ -0.62
CBWD1-228ENST00000619157 RIMS2Q9UQ26 1411 aa11.18□□□□□ -0.62
CBWD1-228ENST00000619157 BACH1O14867 736 aa11.18□□□□□ -0.62
CBWD1-228ENST00000619157 DYRK3O43781 588 aa11.18□□□□□ -0.62
CBWD1-228ENST00000619157 SIN3BO75182 1162 aa11.18□□□□□ -0.62
CBWD1-228ENST00000619157 SKIP12755 728 aa11.18□□□□□ -0.62
CBWD1-228ENST00000619157 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
CBWD1-228ENST00000619157 ALKQ9UM73 1620 aa11.17□□□□□ -0.62
CBWD1-228ENST00000619157 NOS2P35228 1153 aa11.17□□□□□ -0.62
CBWD1-228ENST00000619157 GRIK4Q16099 956 aa11.17□□□□□ -0.62
CBWD1-228ENST00000619157 SLC9A9Q8IVB4 645 aa11.17□□□□□ -0.62
CBWD1-228ENST00000619157 NEUROD4Q9HD90 331 aa11.17□□□□□ -0.62
CBWD1-228ENST00000619157 CPS1P31327 1500 aa11.17□□□□□ -0.62
CBWD1-228ENST00000619157 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 EML1O00423 815 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 TEAD4Q15561 434 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 NOD1Q9Y239 953 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 EID1Q9Y6B2 187 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
CBWD1-228ENST00000619157 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
CBWD1-228ENST00000619157 SLC26A8Q96RN1 970 aa11.15□□□□□ -0.62
CBWD1-228ENST00000619157 ADAMTS13Q76LX8 1427 aa11.15□□□□□ -0.62
CBWD1-228ENST00000619157 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.63
CBWD1-228ENST00000619157 ADH7P40394 386 aa11.14□□□□□ -0.63
CBWD1-228ENST00000619157 EPHA4P54764 986 aa11.14□□□□□ -0.63
CBWD1-228ENST00000619157 TRIM28Q13263 835 aaKnown RBP11.14□□□□□ -0.63
CBWD1-228ENST00000619157 NCOA4Q13772 614 aa11.14□□□□□ -0.63
CBWD1-228ENST00000619157 RAB3GAP2Q9H2M9 1393 aa11.14□□□□□ -0.63
CBWD1-228ENST00000619157 SOX11P35716 441 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 SPEM2Q0P670 501 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 DEPDC4Q8N2C3 294 aa11.13□□□□□ -0.63
CBWD1-228ENST00000619157 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms