RNA–Protein interactions for RNA: ENST00000619009.4

BARD1-213, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-213ENST00000619009 PDCP20941 246 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 FAM89AQ96GI7 184 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 TCEANC2Q96MN5 208 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 TTC14Q96N46 770 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 EPC1Q9H2F5 836 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 USP21Q9UK80 565 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 SNX14Q9Y5W7 946 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 CEP135Q66GS9 1140 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 KSR2Q6VAB6 950 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 DNAJC25Q9H1X3 360 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 BOLA2Q9H3K6 86 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 HSPA4P34932 840 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 GYS2P54840 703 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 CDC37L1Q7L3B6 337 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
BARD1-213ENST00000619009 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 TRIM66O15016 1216 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 ST5P78524 1137 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 ZSCAN31Q96LW9 406 aaPredicted RBP11.34□□□□□ -0.59
BARD1-213ENST00000619009 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
BARD1-213ENST00000619009 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
BARD1-213ENST00000619009 ZNF75DP51815 510 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 TAF3Q5VWG9 929 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 PLA2G4DQ86XP0 818 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 USP44Q9H0E7 712 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
BARD1-213ENST00000619009 KCNQ2O43526 872 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 NR1I2O75469 434 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 RAD51AP2Q09MP3 1159 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 HOMER1Q86YM7 354 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 PAXBP1Q9Y5B6 917 aa11.34□□□□□ -0.59
BARD1-213ENST00000619009 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 FHOD1Q9Y613 1164 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 RAD50Q92878 1312 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 HDAC5Q9UQL6 1122 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 MST1RQ04912 1400 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 GRM8O00222 908 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 KIF1BPQ96EK5 621 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
BARD1-213ENST00000619009 SH2B1Q9NRF2 756 aaPredicted RBP11.33□□□□□ -0.6
BARD1-213ENST00000619009 TNS3Q68CZ2 1445 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 FANCGO15287 622 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
BARD1-213ENST00000619009 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
BARD1-213ENST00000619009 PIGBQ92521 554 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 ZNF594Q96JF6 807 aaPredicted RBP11.32□□□□□ -0.6
BARD1-213ENST00000619009 SCAND2PQ9GZW5 306 aaPredicted RBP11.32□□□□□ -0.6
BARD1-213ENST00000619009 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
BARD1-213ENST00000619009 CNNM1Q9NRU3 951 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 PSMA5P28066 241 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 TNNT3P45378 269 aaPredicted RBP11.32□□□□□ -0.6
BARD1-213ENST00000619009 TUBGCP6Q96RT7 1819 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 PLA2G4AP47712 749 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 FKBP4Q02790 459 aaKnown RBP eCLIP11.32□□□□□ -0.6
BARD1-213ENST00000619009 CCDC57Q2TAC2 916 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
BARD1-213ENST00000619009 CYP2C19P33261 490 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 BLOC1S2Q6QNY1 142 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 C11orf57Q6ZUT1 292 aaPredicted RBP11.31□□□□□ -0.6
BARD1-213ENST00000619009 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 SGSM2O43147 1006 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
BARD1-213ENST00000619009 PTH1RQ03431 593 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 ME3Q16798 604 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 NYAP1Q6ZVC0 841 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 ZNF397Q8NF99 534 aaPredicted RBP11.31□□□□□ -0.6
BARD1-213ENST00000619009 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 RGPD8O14715 1765 aaPredicted RBP11.31□□□□□ -0.6
BARD1-213ENST00000619009 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
BARD1-213ENST00000619009 PPFIA3O75145 1194 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
BARD1-213ENST00000619009 SKILP12757 684 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 FTOQ9C0B1 505 aaKnown RBP eCLIP11.3□□□□□ -0.6
BARD1-213ENST00000619009 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
BARD1-213ENST00000619009 CLCN6P51797 869 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
BARD1-213ENST00000619009 PTPN21Q16825 1174 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 SYNE4Q8N205 404 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 SDF4Q9BRK5 362 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
BARD1-213ENST00000619009 DDX19AQ9NUU7 478 aaKnown RBP11.3□□□□□ -0.6
BARD1-213ENST00000619009 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
BARD1-213ENST00000619009 KINO60870 393 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms