RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	GTF3C6	Q969F1	213 aa		13.28	□□□□□ -0.28
TP53-223	ENST00000618944	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.28	□□□□□ -0.28
TP53-223	ENST00000618944	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.28	□□□□□ -0.28
TP53-223	ENST00000618944	JCAD	Q9P266	1359 aa		13.28	□□□□□ -0.28
TP53-223	ENST00000618944		A0A1B0GUL7	405 aa		13.28	□□□□□ -0.28
TP53-223	ENST00000618944	ZNF500	O60304	480 aa	Predicted RBP	13.28	□□□□□ -0.28
TP53-223	ENST00000618944	DCC	P43146	1447 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	GOLGA6L4	A6NEF3	574 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	SCRN1	Q12765	414 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	UVSSA	Q2YD98	709 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	FAM89A	Q96GI7	184 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	SPATA32	Q96LK8	384 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	CCT2	P78371	535 aa	Known RBP	13.27	□□□□□ -0.29
TP53-223	ENST00000618944	CCDC57	Q2TAC2	916 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	FUCA2	Q9BTY2	467 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	SLAIN2	Q9P270	581 aa		13.27	□□□□□ -0.29
TP53-223	ENST00000618944	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
TP53-223	ENST00000618944		H3BQV1	296 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	KDM4A	O75164	1064 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	CEBPZ	Q03701	1054 aa	Known RBP	13.26	□□□□□ -0.29
TP53-223	ENST00000618944	APOBR	Q0VD83	1088 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	GORAB	Q5T7V8	394 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	IFFO2	Q5TF58	517 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.26	□□□□□ -0.29
TP53-223	ENST00000618944	CEP126	Q9P2H0	1117 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	ASAP1	Q9ULH1	1129 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	STRCP1	A6NGW2	1772 aa		13.26	□□□□□ -0.29
TP53-223	ENST00000618944	HSPD1	P10809	573 aa	Known RBP	13.25	□□□□□ -0.29
TP53-223	ENST00000618944	ADORA1	P30542	326 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	NKX1-1	Q15270	411 aa	Predicted RBP	13.25	□□□□□ -0.29
TP53-223	ENST00000618944	TTLL5	Q6EMB2	1281 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	DHX32	Q7L7V1	743 aa	Known RBP	13.25	□□□□□ -0.29
TP53-223	ENST00000618944	CKAP2L	Q8IYA6	745 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	SYNE4	Q8N205	404 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	CARD10	Q9BWT7	1032 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	HELLS	Q9NRZ9	838 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	DACT1	Q9NYF0	836 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	AP5Z1	O43299	807 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	ZMYM1	Q5SVZ6	1142 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	LEO1	Q8WVC0	666 aa	Predicted RBP	13.25	□□□□□ -0.29
TP53-223	ENST00000618944	GPR108	Q9NPR9	543 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	TMOD3	Q9NYL9	352 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944	SH3TC1	Q8TE82	1336 aa		13.25	□□□□□ -0.29
TP53-223	ENST00000618944		M0R2C6	588 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	RNF113A	O15541	343 aa	Known RBP	13.24	□□□□□ -0.29
TP53-223	ENST00000618944	TCIRG1	Q13488	830 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	DNAJC10	Q8IXB1	793 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	VSIG10	Q8N0Z9	540 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	TTC12	Q9H892	705 aa	Predicted RBP	13.24	□□□□□ -0.29
TP53-223	ENST00000618944	NCOA5	Q9HCD5	579 aa	Known RBP	13.24	□□□□□ -0.29
TP53-223	ENST00000618944		E7EWF7	191 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	PDIA4	P13667	645 aa	Known RBP	13.24	□□□□□ -0.29
TP53-223	ENST00000618944	MCM5	P33992	734 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	HSP90AB3P	Q58FF7	597 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	TAF7L	Q5H9L4	462 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	OSBP2	Q969R2	916 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.24	□□□□□ -0.29
TP53-223	ENST00000618944	NUP62CL	Q9H1M0	184 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	MAST3	O60307	1309 aa		13.24	□□□□□ -0.29
TP53-223	ENST00000618944	AFDN	P55196	1824 aa	Known RBP	13.23	□□□□□ -0.29
TP53-223	ENST00000618944	CCDC192	P0DO97	292 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	GPT	P24298	496 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	WASHC4	Q2M389	1173 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	TTC39A	Q5SRH9	613 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	ISCA1	Q9BUE6	129 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	DSCC1	Q9BVC3	393 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	ARFGEF2	Q9Y6D5	1785 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	HAND2	P61296	217 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	MAP3K11	Q16584	847 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	CCDC158	Q5M9N0	1113 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	PIGB	Q92521	554 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	XAGE2	Q96GT9	111 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	PGBD1	Q96JS3	809 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	RFX7	Q2KHR2	1363 aa		13.23	□□□□□ -0.29
TP53-223	ENST00000618944	NR1I2	O75469	434 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	CIAO1	O76071	339 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	CTDNEP1	O95476	244 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	HMGB1	P09429	215 aa	Known RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	GUCY1B3	Q02153	619 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	REST	Q13127	1097 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	SCARF1	Q14162	830 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	TNMD	Q9H2S6	317 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	PALLD	Q8WX93	1383 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	ELP1	O95163	1332 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	PFKFB2	O60825	505 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	EXOSC10	Q01780	885 aa	Known RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	PI16	Q6UXB8	463 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	NSUN7	Q8NE18	718 aa	Known RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	BICD2	Q8TD16	824 aa		13.22	□□□□□ -0.29
TP53-223	ENST00000618944	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	GPHN	Q9NQX3	736 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	COL5A2	P05997	1499 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	SOS2	Q07890	1332 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-223	ENST00000618944	PKD1L3	Q7Z443	1732 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	TPM2	P07951	284 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	TYRO3	Q06418	890 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	HLF	Q16534	295 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms