RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 CCDC171Q6TFL3 1326 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ADAMTSL3P82987 1691 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 GRM8O00222 908 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 OFD1O75665 1012 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ALDH1L1O75891 902 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 GLRX3O76003 335 aaKnown RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 MBD3O95983 291 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ZSCAN22P10073 491 aaPredicted RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 NMIQ13287 307 aaPredicted RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ME3Q16798 604 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ZNF589Q86UQ0 364 aaPredicted RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 AACSQ86V21 672 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ANKLE2Q86XL3 938 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 CCDC83Q8IWF9 413 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 KCNH5Q8NCM2 988 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 JARID2Q92833 1246 aaPredicted RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 DDX17Q92841 729 aaKnown RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 CCDC8Q9H0W5 538 aaPredicted RBP5.2□□□□□ -1.58
SEC22B-202ENST00000618538 ECHDC1Q9NTX5 307 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 MTMR6Q9Y217 621 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 JCADQ9P266 1359 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 MED23Q9ULK4 1368 aa5.2□□□□□ -1.58
SEC22B-202ENST00000618538 WDR33Q9C0J8 1336 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 AP5Z1O43299 807 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 STX6O43752 255 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 ZNF500O60304 480 aaPredicted RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 PPP1R37O75864 691 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 F13A1P00488 732 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 AIMP1Q12904 312 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 OS9Q13438 667 aaPredicted RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 AMOTQ4VCS5 1084 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 KIAA1211Q6ZU35 1233 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 NECAB1Q8N987 351 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 LINS1Q8NG48 757 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 TCEANC2Q96MN5 208 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 JAKMIP1Q96N16 626 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 SIL1Q9H173 461 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 SNRKQ9NRH2 765 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 RYDENQ9NUL5 291 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 C9orf78Q9NZ63 289 aaPredicted RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 TPCN1Q9ULQ1 816 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 LIMCH1Q9UPQ0 1083 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 RBM8AQ9Y5S9 174 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 NDUFB9Q9Y6M9 179 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 C1orf167Q5SNV9 1468 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 MST1RQ04912 1400 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 NEURL1BA8MQ27 555 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 FIBPO43427 364 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 EVI5O60447 810 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 GJB2P29033 226 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 RFX5P48382 616 aaPredicted RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 DNM1Q05193 864 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 HS1BP3Q53T59 392 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 C1orf141Q5JVX7 400 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 CREB3L3Q68CJ9 461 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 TYW1BQ6NUM6 668 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 FAM173BQ6P4H8 233 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 PAXIP1Q6ZW49 1069 aaPredicted RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 CLASRPQ8N2M8 674 aaKnown RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 MPNDQ8N594 471 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 MAP4K1Q92918 833 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 ZNF496Q96IT1 587 aaPredicted RBP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 FUCA2Q9BTY2 467 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 TMUB1Q9BVT8 246 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 TSPY26PQ9H489 355 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 DDX21Q9NR30 783 aaKnown RBP eCLIP5.19□□□□□ -1.58
SEC22B-202ENST00000618538 DIAPH3Q9NSV4 1193 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 ZKSCAN5Q9Y2L8 839 aa5.19□□□□□ -1.58
SEC22B-202ENST00000618538 NPHP3Q7Z494 1330 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 ARFGEF2Q9Y6D5 1785 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 SLC27A2O14975 620 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 MYL6BP14649 208 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 ZC3H6P61129 1189 aaKnown RBP5.18□□□□□ -1.58
SEC22B-202ENST00000618538 TOB2Q14106 344 aaPredicted RBP5.18□□□□□ -1.58
SEC22B-202ENST00000618538 HSP90AB4PQ58FF6 505 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 VPS53Q5VIR6 699 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 LMOD2Q6P5Q4 547 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 ZNF790Q6PG37 636 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 XAGE3Q8WTP9 111 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 BOLA2Q9H3K6 86 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 PDRG1Q9NUG6 133 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 HPS5Q9UPZ3 1129 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 STRCP1A6NGW2 1772 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 TJP1Q07157 1748 aa5.18□□□□□ -1.58
SEC22B-202ENST00000618538 CYP27B1O15528 508 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 IFIT2P09913 472 aaKnown RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 HCLS1P14317 486 aaPredicted RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 PHKG2P15735 406 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 GCKRQ14397 625 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 SLFNL1Q499Z3 407 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 CDC37L1Q7L3B6 337 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 KRT28Q7Z3Y7 464 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 NFATC2IPQ8NCF5 419 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 EVI5LQ96CN4 794 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 TM6SF1Q9BZW5 370 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 SLC52A2Q9HAB3 445 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 USP25Q9UHP3 1055 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 DBNLQ9UJU6 430 aaKnown RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 USP16Q9Y5T5 823 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms