RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZBTB48P10074 688 aaPredicted RBP6.12□□□□□ -1.43
SNCA-213ENST00000618500 GTF2E1P29083 439 aaPredicted RBP6.12□□□□□ -1.43
SNCA-213ENST00000618500 C3orf67Q6ZVT6 689 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 SULF1Q8IWU6 871 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 ERO1AQ96HE7 468 aa6.12□□□□□ -1.43
SNCA-213ENST00000618500 MANSC4A6NHS7 340 aaPredicted RBP6.11□□□□□ -1.43
SNCA-213ENST00000618500 HSPA5P11021 654 aaKnown RBP6.11□□□□□ -1.43
SNCA-213ENST00000618500 EIF4A1P60842 406 aaKnown RBP6.11□□□□□ -1.43
SNCA-213ENST00000618500 LDLRAD1Q5T700 205 aa6.11□□□□□ -1.43
SNCA-213ENST00000618500 OTUD5Q96G74 571 aa6.11□□□□□ -1.43
SNCA-213ENST00000618500 ZCCHC17Q9NP64 241 aaKnown RBP6.11□□□□□ -1.43
SNCA-213ENST00000618500 ADM5C9JUS6 153 aa6.11□□□□□ -1.43
SNCA-213ENST00000618500 HDAC9Q9UKV0 1011 aa6.11□□□□□ -1.43
SNCA-213ENST00000618500 MGAMO43451 1857 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 ECE2O60344 883 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 PRMT2P55345 433 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 RSBN1LQ6PCB5 846 aaPredicted RBP6.1□□□□□ -1.43
SNCA-213ENST00000618500 DDX46Q7L014 1031 aaKnown RBP6.1□□□□□ -1.43
SNCA-213ENST00000618500 NUTM1Q86Y26 1132 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 RTF1Q92541 710 aaKnown RBP6.1□□□□□ -1.43
SNCA-213ENST00000618500 CFAP53Q96M91 514 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 PTPN22Q9Y2R2 807 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 MED23Q9ULK4 1368 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 GNRH1P01148 92 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 HSP90B1P14625 803 aaKnown RBP6.1□□□□□ -1.43
SNCA-213ENST00000618500 TRIM28Q13263 835 aaKnown RBP6.1□□□□□ -1.43
SNCA-213ENST00000618500 NLRP10Q86W26 655 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 PIP4P2Q8N4L2 257 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 ZBED3Q96IU2 234 aaPredicted RBP6.1□□□□□ -1.43
SNCA-213ENST00000618500 GGA3Q9NZ52 723 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 SH3TC1Q8TE82 1336 aa6.1□□□□□ -1.43
SNCA-213ENST00000618500 PRKAR2BP31323 418 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 GRM1Q13255 1194 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 PDIA6Q15084 440 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 NUDCQ9Y266 331 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 ZNF330Q9Y3S2 320 aaPredicted RBP6.09□□□□□ -1.43
SNCA-213ENST00000618500 COL2A1P02458 1487 aaPredicted RBP6.09□□□□□ -1.43
SNCA-213ENST00000618500 RAD17O75943 681 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 HOXB7P09629 217 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 ARHGEF6Q15052 776 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 WASHC4Q2M389 1173 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 TTLL7Q6ZT98 887 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 OTOP1Q7RTM1 612 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 APOBEC3FQ8IUX4 373 aaKnown RBP6.09□□□□□ -1.43
SNCA-213ENST00000618500 MTMR14Q8NCE2 650 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 ZNF333Q96JL9 665 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 PHACTR3Q96KR7 559 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 ZNF408Q9H9D4 720 aa6.09□□□□□ -1.43
SNCA-213ENST00000618500 FKBP1AP62942 108 aaKnown RBP6.09□□□□□ -1.44
SNCA-213ENST00000618500 SPRYD7Q5W111 196 aa6.09□□□□□ -1.44
SNCA-213ENST00000618500 TCIRG1Q13488 830 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 TBC1D16Q8TBP0 767 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 ISCA1Q9BUE6 129 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 ZBTB12Q9Y330 459 aaPredicted RBP6.08□□□□□ -1.44
SNCA-213ENST00000618500 SHTN1A0MZ66 631 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 NF2P35240 595 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 SCARF1Q14162 830 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 TBC1D10BQ4KMP7 808 aaPredicted RBP6.08□□□□□ -1.44
SNCA-213ENST00000618500 ARMC9Q7Z3E5 817 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 SAMD7Q7Z3H4 446 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 IFNL1Q8IU54 200 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 MYOZ2Q9NPC6 264 aa6.08□□□□□ -1.44
SNCA-213ENST00000618500 ALPK3Q96L96 1907 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 UBE2Q1Q7Z7E8 422 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 POLLQ9UGP5 575 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 ZNF804BA4D1E1 1349 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 GPSM2P81274 684 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 PLEKHF1Q96S99 279 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
SNCA-213ENST00000618500 POTEFA5A3E0 1075 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 TBC1D8O95759 1140 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 EGFRP00533 1210 aa6.07□□□□□ -1.44
SNCA-213ENST00000618500 ANGEL2Q5VTE6 544 aaKnown RBP6.07□□□□□ -1.44
SNCA-213ENST00000618500 SAMD1Q6SPF0 538 aaPredicted RBP6.07□□□□□ -1.44
SNCA-213ENST00000618500 ATP2B4P23634 1241 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 WNK4Q96J92 1243 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 COLQQ9Y215 455 aaPredicted RBP6.06□□□□□ -1.44
SNCA-213ENST00000618500 CACNA1FO60840 1977 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 USP17L8P0C7I0 530 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 PIP4K2AP48426 406 aaPredicted RBP6.06□□□□□ -1.44
SNCA-213ENST00000618500 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 OTUD7BQ6GQQ9 843 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 C15orf52Q6ZUT6 534 aaKnown RBP6.06□□□□□ -1.44
SNCA-213ENST00000618500 MCM10Q7L590 875 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 SLC51AQ86UW1 340 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 PLBD2Q8NHP8 589 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 XDHP47989 1333 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 MAST2Q6P0Q8 1798 aa6.06□□□□□ -1.44
SNCA-213ENST00000618500 USP17L3A6NCW0 530 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 USP17L4A6NCW7 530 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 BMP8BP34820 402 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 USP17L1Q7RTZ2 530 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 NKX2-3Q8TAU0 364 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 U2SURPO15042 1029 aaKnown RBP6.05□□□□□ -1.44
SNCA-213ENST00000618500 GPTP24298 496 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 STRIP1Q5VSL9 837 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 NBPF11Q86T75 865 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 ZBTB3Q9H5J0 574 aa6.05□□□□□ -1.44
SNCA-213ENST00000618500 GGA1Q9UJY5 639 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms