RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 TNP2Q05952 138 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 HDAC1Q13547 482 aaPredicted RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 PWP2Q15269 919 aaKnown RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 C11orf91Q3C1V1 193 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 HDGFL1Q5TGJ6 251 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 LRRC69Q6ZNQ3 347 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 CHSY3Q70JA7 882 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 RPAINQ86UA6 219 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 ALYREFQ86V81 257 aaKnown RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 SLC9A9Q8IVB4 645 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 TNS4Q8IZW8 715 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 JMYQ8N9B5 988 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 RHPN1Q8TCX5 695 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 PDLIM2Q96JY6 352 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 BTBD6Q96KE9 485 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 ZIC5Q96T25 663 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 NDFIP2Q9NV92 336 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 DNAAF2Q9NVR5 837 aaKnown RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 NOP53Q9NZM5 478 aaKnown RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 SCHIP1Q9P0W5 487 aaPredicted RBP4.27□□□□□ -1.73
SMC5-204ENST00000618375 ZKSCAN5Q9Y2L8 839 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 MRVI1Q9Y6F6 885 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 USP3Q9Y6I4 520 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 KANK1Q14678 1352 aa4.27□□□□□ -1.73
SMC5-204ENST00000618375 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 RAD54L2Q9Y4B4 1467 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 SERTM1A2A2V5 107 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 USP17L3A6NCW0 530 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 USP17L4A6NCW7 530 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 POM121CA8CG34 1229 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 ARID4AP29374 1257 aaPredicted RBP4.26□□□□□ -1.73
SMC5-204ENST00000618375 NOS2P35228 1153 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 TXLNAP40222 546 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 TDO2P48775 406 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 RRP1P56182 461 aaKnown RBP4.26□□□□□ -1.73
SMC5-204ENST00000618375 ATP2B3Q16720 1220 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 CCDC96Q2M329 555 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 SKOR2Q2VWA4 1001 aaPredicted RBP4.26□□□□□ -1.73
SMC5-204ENST00000618375 MUM1L1Q5H9M0 696 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 CCDC102BQ68D86 513 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 USP17L2Q6R6M4 530 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 USP17L1Q7RTZ2 530 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 ANKRD7Q92527 254 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 CWC22Q9HCG8 908 aaKnown RBP4.26□□□□□ -1.73
SMC5-204ENST00000618375 IQSEC3Q9UPP2 1182 aaPredicted RBP4.26□□□□□ -1.73
SMC5-204ENST00000618375 PAXBP1Q9Y5B6 917 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 ROCK2O75116 1388 aaKnown RBP4.26□□□□□ -1.73
SMC5-204ENST00000618375 NPC1L1Q9UHC9 1359 aa4.26□□□□□ -1.73
SMC5-204ENST00000618375 CCDC196A0A1B0GTZ2 297 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 GOLGA6L22H0YM25 854 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 CTAGE5O15320 804 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 DHX16O60231 1041 aaKnown RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 SLFN14P0C7P3 912 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 FAM157BP0CG42 384 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 CCDC27Q2M243 656 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 C8orf34Q49A92 452 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 FAM182BQ5T319 152 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 ZNF468Q5VIY5 522 aaPredicted RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 RINLQ6ZS11 566 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 CCDC91Q7Z6B0 441 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 OGFOD1Q8N543 542 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 SGSM3Q96HU1 749 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 ZNF594Q96JF6 807 aaPredicted RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 PAIP2Q9BPZ3 127 aaKnown RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 TACO1Q9BSH4 297 aaKnown RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 RASSF4Q9H2L5 321 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 SUV39H2Q9H5I1 410 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 UPF2Q9HAU5 1272 aaKnown RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 AVENQ9NQS1 362 aaPredicted RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 CCDC39Q9UFE4 941 aa4.25□□□□□ -1.73
SMC5-204ENST00000618375 MKRN1Q9UHC7 482 aaKnown RBP4.25□□□□□ -1.73
SMC5-204ENST00000618375 BAZ1AQ9NRL2 1556 aaPredicted RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 NCOA3Q9Y6Q9 1424 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 CCDC189A1A4V9 331 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 KRBA1A5PL33 1030 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 PALM3A6NDB9 673 aaPredicted RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 ATP9BO43861 1147 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 REC8O95072 547 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 HSPA5P11021 654 aaKnown RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 COL8A1P27658 744 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 CASQ1P31415 396 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 NASPP49321 788 aaPredicted RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 PSMA6P60900 246 aaKnown RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 TERF2Q15554 542 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 TEAD4Q15561 434 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 UVSSAQ2YD98 709 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 CDCA8Q53HL2 280 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 SAMD5Q5TGI4 173 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 LRCH2Q5VUJ6 765 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 SYT9Q86SS6 491 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 TMTC2Q8N394 836 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 ZNF526Q8TF50 670 aaPredicted RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 ZDHHC1Q8WTX9 485 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 TBC1D22AQ8WUA7 517 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 CHMP7Q8WUX9 453 aaPredicted RBP4.24□□□□□ -1.73
SMC5-204ENST00000618375 CHMP4CQ96CF2 233 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 CEP63Q96MT8 703 aa4.24□□□□□ -1.73
SMC5-204ENST00000618375 TSPAN18Q96SJ8 248 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms