RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 AKR1B10O60218 316 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 MXRA7P84157 204 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 CCDC77Q9BR77 488 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
CCDC144B-208ENST00000618081 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 HAND2P61296 217 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 ATP6V1AP38606 617 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 CALML3P27482 149 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 PAIP2Q9BPZ3 127 aaKnown RBP12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 CALM1P0DP23 149 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 CALM2P0DP24 149 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 CALM3P0DP25 149 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 UBASH3AP57075 661 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 FBF1Q8TES7 1133 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 PSMA7O14818 248 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 GNAT2P19087 354 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 CEP135Q66GS9 1140 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 SCAF11Q99590 1463 aaKnown RBP12.69□□□□□ -0.38
CCDC144B-208ENST00000618081 ZNF165P49910 485 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 NME9Q86XW9 330 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 NAPAP54920 295 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 GRM1Q13255 1194 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 TTC14Q96N46 770 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 MAK16Q9BXY0 300 aaKnown RBP12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 CYP7A1P22680 504 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 CTAGE9A4FU28 777 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 ADCY5O95622 1261 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 ATP5J2-PTCD1G3V325 749 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 PSMC4P43686 418 aa12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 NAA16Q6N069 864 aaPredicted RBP12.68□□□□□ -0.38
CCDC144B-208ENST00000618081 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 SLC4A4Q9Y6R1 1079 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 FAM13AO94988 1023 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 POLD1P28340 1107 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 HSPA4P34932 840 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 SPAG1Q07617 926 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 NBPF8Q3BBV2 869 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 DAAM2Q86T65 1068 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 CCDC50Q8IVM0 306 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 SH3BP5O60239 455 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
CCDC144B-208ENST00000618081 TUBB4BP68371 445 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 SERPINA10Q9UK55 444 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 UNC13AQ9UPW8 1703 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 RRAGBQ5VZM2 374 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 SMC6Q96SB8 1091 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 CCDC6Q16204 474 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 JDP2Q8WYK2 163 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 PI4KAP2A4QPH2 592 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 TNNI2P48788 182 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 GNG11P61952 73 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 PICALMQ13492 652 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 PI4KAP1Q8N8J0 262 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 ASXL1Q8IXJ9 1541 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 RAPGEF6Q8TEU7 1601 aa12.66□□□□□ -0.38
CCDC144B-208ENST00000618081 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 USP25Q9UHP3 1055 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 FANCAO15360 1455 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 AFMP43652 599 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 CFAP58Q5T655 872 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 FAM212AQ96EL1 285 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 GMNNO75496 209 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 TRIM27P14373 513 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 TSGA10Q9BZW7 698 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 ASIC1P78348 528 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 ZBTB16Q05516 673 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
CCDC144B-208ENST00000618081 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms