RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CCDC57Q2TAC2 916 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
CNOT3-209ENST00000617930 TTC14Q96N46 770 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 TNS1Q9HBL0 1735 aaKnown RBP21.11■□□□□ 0.97
CNOT3-209ENST00000617930 CCDC171Q6TFL3 1326 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 MED23Q9ULK4 1368 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 CYP2E1P05181 493 aaPredicted RBP21.11■□□□□ 0.97
CNOT3-209ENST00000617930 TBC1D9BQ66K14 1250 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 MAP4K1Q92918 833 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 GREM2Q9H772 168 aa21.11■□□□□ 0.97
CNOT3-209ENST00000617930 ZNF609O15014 1411 aa21.1■□□□□ 0.97
CNOT3-209ENST00000617930 A0A1B0GUL7 405 aa21.1■□□□□ 0.97
CNOT3-209ENST00000617930 DDX11L8A8MPP1 907 aa21.1■□□□□ 0.97
CNOT3-209ENST00000617930 SLFNL1Q499Z3 407 aa21.1■□□□□ 0.97
CNOT3-209ENST00000617930 PRPF40BQ6NWY9 871 aaKnown RBP21.1■□□□□ 0.97
CNOT3-209ENST00000617930 DNAJC2Q99543 621 aaKnown RBP21.1■□□□□ 0.97
CNOT3-209ENST00000617930 NARFQ9UHQ1 456 aa21.1■□□□□ 0.97
CNOT3-209ENST00000617930 PHF14O94880 888 aa21.09■□□□□ 0.97
CNOT3-209ENST00000617930 HCLS1P14317 486 aaPredicted RBP21.09■□□□□ 0.97
CNOT3-209ENST00000617930 CUL4AQ13619 759 aa21.09■□□□□ 0.97
CNOT3-209ENST00000617930 DDX46Q7L014 1031 aaKnown RBP21.09■□□□□ 0.97
CNOT3-209ENST00000617930 ZDHHC9Q9Y397 364 aa21.09■□□□□ 0.97
CNOT3-209ENST00000617930 RTCBQ9Y3I0 505 aaKnown RBP21.09■□□□□ 0.97
CNOT3-209ENST00000617930 TAF6LQ9Y6J9 622 aa21.09■□□□□ 0.97
CNOT3-209ENST00000617930 CASZ1Q86V15 1759 aa21.09■□□□□ 0.97
CNOT3-209ENST00000617930 COL24A1Q17RW2 1714 aa21.09■□□□□ 0.97
CNOT3-209ENST00000617930 SEC62Q99442 399 aaKnown RBP21.09■□□□□ 0.97
CNOT3-209ENST00000617930 LAMB2P55268 1798 aa21.08■□□□□ 0.97
CNOT3-209ENST00000617930 HIP1O00291 1037 aa21.08■□□□□ 0.97
CNOT3-209ENST00000617930 ADORA1P30542 326 aa21.08■□□□□ 0.97
CNOT3-209ENST00000617930 CTSWP56202 376 aa21.08■□□□□ 0.97
CNOT3-209ENST00000617930 TXNRD1Q16881 649 aa21.08■□□□□ 0.97
CNOT3-209ENST00000617930 RBM8AQ9Y5S9 174 aaKnown RBP21.08■□□□□ 0.97
CNOT3-209ENST00000617930 GOLGA6L3A6NEY3 463 aa21.07■□□□□ 0.96
CNOT3-209ENST00000617930 CLEC4GQ6UXB4 293 aa21.07■□□□□ 0.96
CNOT3-209ENST00000617930 BICDL1Q6ZP65 573 aa21.07■□□□□ 0.96
CNOT3-209ENST00000617930 LARP6Q9BRS8 491 aaKnown RBP21.07■□□□□ 0.96
CNOT3-209ENST00000617930 RIPOR2Q9Y4F9 1068 aa21.07■□□□□ 0.96
CNOT3-209ENST00000617930 TRAK2O60296 914 aa21.07■□□□□ 0.96
CNOT3-209ENST00000617930 ITGA6P23229 1130 aa21.07■□□□□ 0.96
CNOT3-209ENST00000617930 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
CNOT3-209ENST00000617930 UTP14AQ9BVJ6 771 aaKnown RBP21.07■□□□□ 0.96
CNOT3-209ENST00000617930 TAF5LO75529 589 aa21.06■□□□□ 0.96
CNOT3-209ENST00000617930 MCM2P49736 904 aa21.06■□□□□ 0.96
CNOT3-209ENST00000617930 C3orf67Q6ZVT6 689 aa21.06■□□□□ 0.96
CNOT3-209ENST00000617930 GZF1Q9H116 711 aaPredicted RBP21.06■□□□□ 0.96
CNOT3-209ENST00000617930 SH3TC1Q8TE82 1336 aa21.06■□□□□ 0.96
CNOT3-209ENST00000617930 PARP10Q53GL7 1025 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 CREB3L3Q68CJ9 461 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 CCDC129Q6ZRS4 1044 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 FAM43AQ8N2R8 423 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 AK7Q96M32 723 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 CEP126Q9P2H0 1117 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 RIC1Q4ADV7 1423 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 PDE8AO60658 829 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 SLC27A3Q5K4L6 730 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 CLEC17AQ6ZS10 378 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 RUFY3Q7L099 469 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 CWC22Q9HCG8 908 aaKnown RBP21.05■□□□□ 0.96
CNOT3-209ENST00000617930 ABCC12Q96J65 1359 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 LRP5O75197 1615 aa21.05■□□□□ 0.96
CNOT3-209ENST00000617930 GOLIM4O00461 696 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 AK2P54819 239 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.04■□□□□ 0.96
CNOT3-209ENST00000617930 SLC27A2O14975 620 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 CASTP20810 708 aaKnown RBP21.04■□□□□ 0.96
CNOT3-209ENST00000617930 ZNF827Q17R98 1081 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 ERFEQ4G0M1 354 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 ZNF652Q9Y2D9 606 aa21.04■□□□□ 0.96
CNOT3-209ENST00000617930 APBA3O96018 575 aa21.03■□□□□ 0.96
CNOT3-209ENST00000617930 SCARF1Q14162 830 aa21.03■□□□□ 0.96
CNOT3-209ENST00000617930 XAGE2Q96GT9 111 aa21.03■□□□□ 0.96
CNOT3-209ENST00000617930 ZSWIM6Q9HCJ5 1215 aa21.03■□□□□ 0.96
CNOT3-209ENST00000617930 PAG1Q9NWQ8 432 aa21.03■□□□□ 0.96
CNOT3-209ENST00000617930 TAF1P21675 1872 aa21.03■□□□□ 0.96
CNOT3-209ENST00000617930 VGLL2Q8N8G2 317 aa21.02■□□□□ 0.96
CNOT3-209ENST00000617930 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
CNOT3-209ENST00000617930 GBP4Q96PP9 640 aa21.02■□□□□ 0.96
CNOT3-209ENST00000617930 TRAPPC3LQ5T215 181 aa21.02■□□□□ 0.96
CNOT3-209ENST00000617930 CCDC24Q8N4L8 307 aa21.02■□□□□ 0.96
CNOT3-209ENST00000617930 CHAMP1Q96JM3 812 aa21.02■□□□□ 0.96
CNOT3-209ENST00000617930 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
CNOT3-209ENST00000617930 RFX7Q2KHR2 1363 aa21.01■□□□□ 0.95
CNOT3-209ENST00000617930 PLSCR1O15162 318 aa21.01■□□□□ 0.95
CNOT3-209ENST00000617930 BAG4O95429 457 aaKnown RBP21.01■□□□□ 0.95
CNOT3-209ENST00000617930 LARGE1O95461 756 aa21.01■□□□□ 0.95
CNOT3-209ENST00000617930 LDHAL6AQ6ZMR3 332 aa21.01■□□□□ 0.95
CNOT3-209ENST00000617930 ZPR1O75312 459 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 IFIT1P09914 478 aaKnown RBP21■□□□□ 0.95
CNOT3-209ENST00000617930 TAF7LQ5H9L4 462 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 INTS4Q96HW7 963 aaKnown RBP21■□□□□ 0.95
CNOT3-209ENST00000617930 TM6SF1Q9BZW5 370 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 SPEF2Q9C093 1822 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 RPAP1Q9BWH6 1393 aaPredicted RBP21■□□□□ 0.95
CNOT3-209ENST00000617930 FSD2A1L4K1 749 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 RGL2O15211 777 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 NUCB2P80303 420 aa21■□□□□ 0.95
CNOT3-209ENST00000617930 TNRC6CQ9HCJ0 1690 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms