RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 ZNF330Q9Y3S2 320 aaPredicted RBP7.8□□□□□ -1.16
CUL1-204ENST00000617797 RBM8AQ9Y5S9 174 aaKnown RBP7.8□□□□□ -1.16
CUL1-204ENST00000617797 MED23Q9ULK4 1368 aa7.8□□□□□ -1.16
CUL1-204ENST00000617797 BCL9O00512 1426 aa7.8□□□□□ -1.16
CUL1-204ENST00000617797 CPA1P15085 419 aa7.8□□□□□ -1.16
CUL1-204ENST00000617797 CASTP20810 708 aaKnown RBP7.8□□□□□ -1.16
CUL1-204ENST00000617797 ATG9AQ7Z3C6 839 aa7.8□□□□□ -1.16
CUL1-204ENST00000617797 ZNF609O15014 1411 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 LTBP4Q8N2S1 1624 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 SPEF2Q9C093 1822 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 BRD1O95696 1058 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 ADCK5Q3MIX3 580 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 KIF6Q6ZMV9 814 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 MAP4K1Q92918 833 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 JAKMIP1Q96N16 626 aaKnown RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 TM6SF1Q9BZW5 370 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 LMBRD1Q9NUN5 540 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 RFX7Q2KHR2 1363 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 JCADQ9P266 1359 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 MYH7P12883 1935 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 STARD3NLO95772 234 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 KCNJ4P48050 445 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 TRIM28Q13263 835 aaKnown RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 KLHL40Q2TBA0 621 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 CREB3L3Q68CJ9 461 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 RUFY3Q7L099 469 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 HAUS7Q99871 368 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 GPR108Q9NPR9 543 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 NDUFB9Q9Y6M9 179 aa7.79□□□□□ -1.16
CUL1-204ENST00000617797 DDX49Q9Y6V7 483 aaKnown RBP7.79□□□□□ -1.16
CUL1-204ENST00000617797 EYA2O00167 538 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 EXOC5O00471 708 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 SLC27A2O14975 620 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 IL15P40933 162 aaPredicted RBP7.78□□□□□ -1.16
CUL1-204ENST00000617797 LRRC24Q50LG9 513 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 ZNF589Q86UQ0 364 aaPredicted RBP7.78□□□□□ -1.16
CUL1-204ENST00000617797 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 LIMCH1Q9UPQ0 1083 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 RPAP1Q9BWH6 1393 aaPredicted RBP7.78□□□□□ -1.16
CUL1-204ENST00000617797 CIAO1O76071 339 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 PCCAP05165 728 aaPredicted RBP7.78□□□□□ -1.16
CUL1-204ENST00000617797 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
CUL1-204ENST00000617797 ZKSCAN1P17029 563 aaPredicted RBP7.78□□□□□ -1.16
CUL1-204ENST00000617797 VPS53Q5VIR6 699 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 CHAMP1Q96JM3 812 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 NEUROD6Q96NK8 337 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 PDRG1Q9NUG6 133 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 CYP46A1Q9Y6A2 500 aa7.78□□□□□ -1.16
CUL1-204ENST00000617797 NWD2Q9ULI1 1742 aa7.77□□□□□ -1.16
CUL1-204ENST00000617797 LARGE1O95461 756 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 CYP19A1P11511 503 aaPredicted RBP7.77□□□□□ -1.17
CUL1-204ENST00000617797 TIMM10P62072 90 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 PPP1R15BQ5SWA1 713 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 GIGYF2Q6Y7W6 1299 aaKnown RBP7.77□□□□□ -1.17
CUL1-204ENST00000617797 PUS3Q9BZE2 481 aaKnown RBP7.77□□□□□ -1.17
CUL1-204ENST00000617797 ISY1Q9ULR0 285 aaKnown RBP7.77□□□□□ -1.17
CUL1-204ENST00000617797 PALLDQ8WX93 1383 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 DPYSL4O14531 572 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 TAF5LO75529 589 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 HLFQ16534 295 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 DDX46Q7L014 1031 aaKnown RBP7.77□□□□□ -1.17
CUL1-204ENST00000617797 KBTBD3Q8NAB2 608 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 SYTL4Q96C24 671 aaPredicted RBP7.77□□□□□ -1.17
CUL1-204ENST00000617797 PLA2G12BQ9BX93 195 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 ZBTB1Q9Y2K1 713 aa7.77□□□□□ -1.17
CUL1-204ENST00000617797 RREB1Q92766 1687 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 A0A1B0GUL7 405 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 CHGBP05060 677 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 MRE11P49959 708 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 CCDC57Q2TAC2 916 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 RNF20Q5VTR2 975 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 GAS2L3Q86XJ1 694 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 KCTD17Q8N5Z5 321 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 ZBTB38Q8NAP3 1195 aaPredicted RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 FAM89AQ96GI7 184 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 ZSCAN31Q96LW9 406 aaPredicted RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 SEC62Q99442 399 aaKnown RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 GRPEL1Q9HAV7 217 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 CDHR2Q9BYE9 1310 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 CICQ96RK0 1608 aaPredicted RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 MYO5AQ9Y4I1 1855 aaKnown RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 GPR37O15354 613 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 NCLP19338 710 aaKnown RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 GPTP24298 496 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 PSMA5P28066 241 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 PRIM1P49642 420 aaKnown RBP7.76□□□□□ -1.17
CUL1-204ENST00000617797 HSP90AB3PQ58FF7 597 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 CCDC129Q6ZRS4 1044 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 TAF6LQ9Y6J9 622 aa7.76□□□□□ -1.17
CUL1-204ENST00000617797 AKAP11Q9UKA4 1901 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms