RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TAF1P21675 1872 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 RAD50Q92878 1312 aa24.96■■□□□ 1.59
CNTNAP3B-212ENST00000617422 ZPR1O75312 459 aa24.95■■□□□ 1.59
CNTNAP3B-212ENST00000617422 DDX46Q7L014 1031 aaKnown RBP24.95■■□□□ 1.59
CNTNAP3B-212ENST00000617422 ANTXR1Q9H6X2 564 aa24.95■■□□□ 1.59
CNTNAP3B-212ENST00000617422 PTH1RQ03431 593 aa24.95■■□□□ 1.58
CNTNAP3B-212ENST00000617422 PROM2Q8N271 834 aa24.95■■□□□ 1.58
CNTNAP3B-212ENST00000617422 AKAP2Q9Y2D5 859 aa24.95■■□□□ 1.58
CNTNAP3B-212ENST00000617422 RTL9Q8NET4 1388 aa24.94■■□□□ 1.58
CNTNAP3B-212ENST00000617422 ATP2B3Q16720 1220 aa24.94■■□□□ 1.58
CNTNAP3B-212ENST00000617422 CCDC152Q4G0S7 254 aa24.94■■□□□ 1.58
CNTNAP3B-212ENST00000617422 HELBQ8NG08 1087 aaPredicted RBP24.94■■□□□ 1.58
CNTNAP3B-212ENST00000617422 HSPA4P34932 840 aa24.93■■□□□ 1.58
CNTNAP3B-212ENST00000617422 PDE8BO95263 885 aa24.93■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SCARF1Q14162 830 aa24.93■■□□□ 1.58
CNTNAP3B-212ENST00000617422 TRAPPC3LQ5T215 181 aa24.93■■□□□ 1.58
CNTNAP3B-212ENST00000617422 GOLIM4O00461 696 aa24.92■■□□□ 1.58
CNTNAP3B-212ENST00000617422 RUFY2Q8WXA3 655 aa24.92■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SETDB2Q96T68 719 aa24.92■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SNRKQ9NRH2 765 aa24.92■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SNAP23O00161 211 aa24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 CCDC24Q8N4L8 307 aa24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 EPB41L2O43491 1005 aaKnown RBP24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 IFIT1P09914 478 aaKnown RBP24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 RFC4P35249 363 aa24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SLFNL1Q499Z3 407 aa24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 IL17RAQ96F46 866 aa24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 PAG1Q9NWQ8 432 aa24.91■■□□□ 1.58
CNTNAP3B-212ENST00000617422 HIP1O00291 1037 aa24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 ZNF589Q86UQ0 364 aaPredicted RBP24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 MED23Q9ULK4 1368 aa24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SLC27A3Q5K4L6 730 aa24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SLC10A5Q5PT55 438 aa24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 KBTBD3Q8NAB2 608 aa24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 RGS17Q9UGC6 210 aaPredicted RBP24.9■■□□□ 1.58
CNTNAP3B-212ENST00000617422 SF3B3Q15393 1217 aaKnown RBP24.89■■□□□ 1.58
CNTNAP3B-212ENST00000617422 PI16Q6UXB8 463 aa24.89■■□□□ 1.58
CNTNAP3B-212ENST00000617422 RASEFQ8IZ41 740 aa24.89■■□□□ 1.58
CNTNAP3B-212ENST00000617422 AKAP11Q9UKA4 1901 aa24.89■■□□□ 1.57
CNTNAP3B-212ENST00000617422 K7ELQ4 463 aaPredicted RBP24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 TAF5LO75529 589 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 FGFR2P21802 821 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 MCCP23508 829 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 ANAPC15P60006 121 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 SEC62Q99442 399 aaKnown RBP24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 HSP90B1P14625 803 aaKnown RBP24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 GORABQ5T7V8 394 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 KIAA1211Q6ZU35 1233 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 NBPF5PQ86XG9 351 aaPredicted RBP24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 MPHOSPH8Q99549 860 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 MROH5Q6ZUA9 1318 aa24.88■■□□□ 1.57
CNTNAP3B-212ENST00000617422 TXNRD1Q16881 649 aa24.87■■□□□ 1.57
CNTNAP3B-212ENST00000617422 CCDC158Q5M9N0 1113 aa24.87■■□□□ 1.57
CNTNAP3B-212ENST00000617422 TTC39AQ5SRH9 613 aa24.87■■□□□ 1.57
CNTNAP3B-212ENST00000617422 CCDC171Q6TFL3 1326 aa24.87■■□□□ 1.57
CNTNAP3B-212ENST00000617422 RFX7Q2KHR2 1363 aa24.87■■□□□ 1.57
CNTNAP3B-212ENST00000617422 ARAP2Q8WZ64 1704 aa24.87■■□□□ 1.57
CNTNAP3B-212ENST00000617422 GTF2E1P29083 439 aaPredicted RBP24.86■■□□□ 1.57
CNTNAP3B-212ENST00000617422 NFIXQ14938 502 aa24.86■■□□□ 1.57
CNTNAP3B-212ENST00000617422 SNX14Q9Y5W7 946 aa24.86■■□□□ 1.57
CNTNAP3B-212ENST00000617422 RXRBP28702 533 aa24.86■■□□□ 1.57
CNTNAP3B-212ENST00000617422 FKBP4Q02790 459 aaKnown RBP eCLIP24.86■■□□□ 1.57
CNTNAP3B-212ENST00000617422 NYXQ9GZU5 481 aa24.86■■□□□ 1.57
CNTNAP3B-212ENST00000617422 TNRC6CQ9HCJ0 1690 aaKnown RBP24.85■■□□□ 1.57
CNTNAP3B-212ENST00000617422 PUM3Q15397 648 aaKnown RBP24.85■■□□□ 1.57
CNTNAP3B-212ENST00000617422 CCDC129Q6ZRS4 1044 aa24.85■■□□□ 1.57
CNTNAP3B-212ENST00000617422 BRPF3Q9ULD4 1205 aa24.85■■□□□ 1.57
CNTNAP3B-212ENST00000617422 ADRA2BP18089 450 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 IGHMBP2P38935 993 aaKnown RBP24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 MCAMP43121 646 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 NEK4P51957 841 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 A0A1B0GUL6 1792 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 ZAP70P43403 619 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 PHKA1P46020 1223 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 MAP4K1Q92918 833 aa24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 UPF3BQ9BZI7 483 aaKnown RBP24.84■■□□□ 1.57
CNTNAP3B-212ENST00000617422 DDIT3P35638 169 aa24.83■■□□□ 1.57
CNTNAP3B-212ENST00000617422 NECTIN1Q15223 517 aa24.83■■□□□ 1.57
CNTNAP3B-212ENST00000617422 CELF1Q92879 486 aaKnown RBP24.83■■□□□ 1.57
CNTNAP3B-212ENST00000617422 WTIPA6NIX2 430 aaPredicted RBP24.83■■□□□ 1.56
CNTNAP3B-212ENST00000617422 CHRNDQ07001 517 aa24.83■■□□□ 1.56
CNTNAP3B-212ENST00000617422 TPTE2Q6XPS3 522 aa24.83■■□□□ 1.56
CNTNAP3B-212ENST00000617422 LPIN2Q92539 896 aa24.83■■□□□ 1.56
CNTNAP3B-212ENST00000617422 GYS1P13807 737 aa24.82■■□□□ 1.56
CNTNAP3B-212ENST00000617422 CCDC102BQ68D86 513 aa24.82■■□□□ 1.56
CNTNAP3B-212ENST00000617422 PRPF40BQ6NWY9 871 aaKnown RBP24.82■■□□□ 1.56
CNTNAP3B-212ENST00000617422 POTEAQ6S8J7 498 aa24.82■■□□□ 1.56
CNTNAP3B-212ENST00000617422 FOXD4L1Q9NU39 408 aa24.82■■□□□ 1.56
CNTNAP3B-212ENST00000617422 RBM8AQ9Y5S9 174 aaKnown RBP24.82■■□□□ 1.56
CNTNAP3B-212ENST00000617422 CDC5LQ99459 802 aaKnown RBP24.81■■□□□ 1.56
CNTNAP3B-212ENST00000617422 MYO5AQ9Y4I1 1855 aaKnown RBP24.81■■□□□ 1.56
CNTNAP3B-212ENST00000617422 ST18O60284 1047 aa24.81■■□□□ 1.56
CNTNAP3B-212ENST00000617422 KCNB2Q92953 911 aa24.81■■□□□ 1.56
CNTNAP3B-212ENST00000617422 CARMIL3Q8ND23 1372 aa24.8■■□□□ 1.56
CNTNAP3B-212ENST00000617422 SSFA2P28290 1259 aa24.8■■□□□ 1.56
CNTNAP3B-212ENST00000617422 RTN4Q9NQC3 1192 aaKnown RBP24.8■■□□□ 1.56
CNTNAP3B-212ENST00000617422 APBA3O96018 575 aa24.8■■□□□ 1.56
CNTNAP3B-212ENST00000617422 ZNF827Q17R98 1081 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms