RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CEP63Q96MT8 703 aa12.15□□□□□ -0.47
CLTCL1-209ENST00000617103 POLR3AO14802 1390 aaPredicted RBP12.15□□□□□ -0.47
CLTCL1-209ENST00000617103 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 DDX12PQ92771 950 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 ATL3Q6DD88 541 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 PTCD1O75127 700 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 PLVAPQ9BX97 442 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 CHMLP26374 656 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 TNIP1Q15025 636 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 CEP85Q6P2H3 762 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 CCDC42Q96M95 316 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 STMN4Q9H169 189 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
CLTCL1-209ENST00000617103 TTC41PQ6P2S7 1318 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 KIF4AO95239 1232 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 CTNNA2P26232 953 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 C8orf58Q8NAV2 365 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 ANKRD18BA2A2Z9 1011 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 CCDC172P0C7W6 258 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 CPLX4Q7Z7G2 160 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 BAG1Q99933 345 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 MYL5Q02045 173 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 SPATA24Q86W54 205 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
CLTCL1-209ENST00000617103 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 RNF123Q5XPI4 1314 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 A0A1W2PRG0 241 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 WTAPQ15007 396 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 CNGA4Q8IV77 575 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 STAT6P42226 847 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 FAM160A1Q05DH4 1040 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 CAPZA3Q96KX2 299 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 TTC14Q96N46 770 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 CCDC77Q9BR77 488 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 HOMER2Q9NSB8 354 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 VAMP4O75379 141 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 ZC3H6P61129 1189 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 CREB3L3Q68CJ9 461 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 C14orf93Q9H972 538 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 RASAL2Q9UJF2 1139 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
CLTCL1-209ENST00000617103 PRC1O43663 620 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 NEBLO76041 1014 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 RBM5P52756 815 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 ELF2Q15723 593 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 DNAJC21Q5F1R6 531 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 CFAP58Q5T655 872 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 B4GALNT4Q76KP1 1039 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 ZNF500O60304 480 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 NMIQ13287 307 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 ZNF75DP51815 510 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 KRT23Q9C075 422 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 A0A1B0GUA9 196 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 PRPHP41219 470 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 SCLT1Q96NL6 688 aa12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 LUC7L2Q9Y383 392 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-209ENST00000617103 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 RTN1Q16799 776 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 DHX58Q96C10 678 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 AKR1B15C9JRZ8 316 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 PPP1R9BQ96SB3 815 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 TRMT112Q9UI30 125 aaKnown RBP12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 IKBKGQ9Y6K9 419 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 A6NNZ2 444 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 CARD6Q9BX69 1037 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 MMRN2Q9H8L6 949 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 CNNM2Q9H8M5 875 aa12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
CLTCL1-209ENST00000617103 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms