RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 AGGF1Q8N302 714 aaeCLIP7.66□□□□□ -1.18
NEAT1-205ENST00000616315 IL22RA1Q8N6P7 574 aa7.66□□□□□ -1.18
NEAT1-205ENST00000616315 LRFN2Q9ULH4 789 aa7.66□□□□□ -1.18
NEAT1-205ENST00000616315 CCDC9Q9Y3X0 531 aaKnown RBP7.66□□□□□ -1.18
NEAT1-205ENST00000616315 ANKMY2Q8IV38 441 aa7.65□□□□□ -1.18
NEAT1-205ENST00000616315 MYO19Q96H55 970 aa7.65□□□□□ -1.18
NEAT1-205ENST00000616315 UBL7Q96S82 380 aaPredicted RBP7.65□□□□□ -1.18
NEAT1-205ENST00000616315 MMP20O60882 483 aa7.64□□□□□ -1.19
NEAT1-205ENST00000616315 XYLBO75191 536 aa7.64□□□□□ -1.19
NEAT1-205ENST00000616315 WEE1P30291 646 aa7.64□□□□□ -1.19
NEAT1-205ENST00000616315 NSUN5Q96P11 429 aaKnown RBP7.64□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L15C9J2P7 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L10C9JJH3 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L13C9JLJ4 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L12C9JPN9 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L11C9JVI0 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L21D6R901 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L18D6R9N7 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L22D6RA61 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L17D6RBQ6 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L19D6RCP7 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L20D6RJB6 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 PAX4O43316 350 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 ATG7O95352 703 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 TGFB1P01137 390 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 ARID4AP29374 1257 aaPredicted RBP7.63□□□□□ -1.19
NEAT1-205ENST00000616315 USP17L24Q0WX57 530 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 CMTR1Q8N1G2 835 aaKnown RBP7.63□□□□□ -1.19
NEAT1-205ENST00000616315 FMNL2Q96PY5 1086 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 TRIM33Q9UPN9 1127 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 RAXQ9Y2V3 346 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 KCNMB2Q9Y691 235 aa7.63□□□□□ -1.19
NEAT1-205ENST00000616315 OAS3Q9Y6K5 1087 aaKnown RBP7.63□□□□□ -1.19
NEAT1-205ENST00000616315 PATL2C9JE40 543 aaKnown RBP7.62□□□□□ -1.19
NEAT1-205ENST00000616315 GLB1P16278 677 aa7.62□□□□□ -1.19
NEAT1-205ENST00000616315 RGL4Q8IZJ4 473 aa7.62□□□□□ -1.19
NEAT1-205ENST00000616315 FAM196BA6NMK8 535 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 KIAA1324LA8MWY0 1029 aaPredicted RBP7.61□□□□□ -1.19
NEAT1-205ENST00000616315 FOXO3O43524 673 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 ADAMTS4O75173 837 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 GHRHP01286 108 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 IGLV1-40P01703 118 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 PSAPP07602 524 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 HOXD8P13378 290 aaPredicted RBP7.61□□□□□ -1.19
NEAT1-205ENST00000616315 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.61□□□□□ -1.19
NEAT1-205ENST00000616315 TREML1Q86YW5 311 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
NEAT1-205ENST00000616315 SRA1Q9HD15 236 aaKnown RBP7.61□□□□□ -1.19
NEAT1-205ENST00000616315 WISP1O95388 367 aa7.6□□□□□ -1.19
NEAT1-205ENST00000616315 BRD1O95696 1058 aa7.6□□□□□ -1.19
NEAT1-205ENST00000616315 IRAK1P51617 712 aa7.6□□□□□ -1.19
NEAT1-205ENST00000616315 ARMC10Q8N2F6 343 aa7.6□□□□□ -1.19
NEAT1-205ENST00000616315 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
NEAT1-205ENST00000616315 COBLO75128 1261 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 TAL1P17542 331 aaPredicted RBP7.59□□□□□ -1.19
NEAT1-205ENST00000616315 SOX18P35713 384 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 TXKP42681 527 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 GP2P55259 537 aaKnown RBP7.59□□□□□ -1.19
NEAT1-205ENST00000616315 KCNA1Q09470 495 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 ZDHHC13Q8IUH4 622 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 VTI1AQ96AJ9 217 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 STOML1Q9UBI4 398 aa7.59□□□□□ -1.19
NEAT1-205ENST00000616315 TM4SF5O14894 197 aa7.58□□□□□ -1.2
NEAT1-205ENST00000616315 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
NEAT1-205ENST00000616315 TRIP4Q15650 581 aaPredicted RBP7.58□□□□□ -1.2
NEAT1-205ENST00000616315 COX20Q5RI15 118 aa7.58□□□□□ -1.2
NEAT1-205ENST00000616315 ADAMTSL4Q6UY14 1074 aa7.58□□□□□ -1.2
NEAT1-205ENST00000616315 KCNK4Q9NYG8 393 aa7.58□□□□□ -1.2
NEAT1-205ENST00000616315 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
NEAT1-205ENST00000616315 LINC01387J3KSC0 135 aa7.57□□□□□ -1.2
NEAT1-205ENST00000616315 ELOAQ14241 798 aaKnown RBP7.57□□□□□ -1.2
NEAT1-205ENST00000616315 COL13A1Q5TAT6 717 aaPredicted RBP7.57□□□□□ -1.2
NEAT1-205ENST00000616315 PPME1Q9Y570 386 aa7.57□□□□□ -1.2
NEAT1-205ENST00000616315 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
NEAT1-205ENST00000616315 GSC2O15499 205 aa7.56□□□□□ -1.2
NEAT1-205ENST00000616315 FAM26DQ5JW98 314 aa7.56□□□□□ -1.2
NEAT1-205ENST00000616315 TXNDC11Q6PKC3 985 aa7.56□□□□□ -1.2
NEAT1-205ENST00000616315 ETFBKMTQ8IXQ9 262 aa7.56□□□□□ -1.2
NEAT1-205ENST00000616315 RBSNQ9H1K0 784 aa7.56□□□□□ -1.2
NEAT1-205ENST00000616315 DHX15O43143 795 aaKnown RBP7.55□□□□□ -1.2
NEAT1-205ENST00000616315 SPINK2P20155 84 aa7.55□□□□□ -1.2
NEAT1-205ENST00000616315 FKBP5Q13451 457 aaPredicted RBP7.55□□□□□ -1.2
NEAT1-205ENST00000616315 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
NEAT1-205ENST00000616315 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
NEAT1-205ENST00000616315 GZF1Q9H116 711 aaPredicted RBP7.55□□□□□ -1.2
NEAT1-205ENST00000616315 C7orf69Q9H7B7 122 aa7.55□□□□□ -1.2
NEAT1-205ENST00000616315 PRR19A6NJB7 356 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 CD68P34810 354 aaPredicted RBP7.54□□□□□ -1.2
NEAT1-205ENST00000616315 ATP11AP98196 1134 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 NFIAQ12857 509 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 NLRP13Q86W25 1043 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 TRIM42Q8IWZ5 723 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 DCAF11Q8TEB1 546 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 LACRTQ9GZZ8 138 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 SAP130Q9H0E3 1048 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 MUC3BQ9H195 1237 aa7.54□□□□□ -1.2
NEAT1-205ENST00000616315 ZMIZ1Q9ULJ6 1067 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms