RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CRB1P82279 1406 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 IGHMBP2P38935 993 aaKnown RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 LEO1Q8WVC0 666 aaPredicted RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 GNL3LQ9NVN8 582 aaKnown RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 CROCC2H7BZ55 1655 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 INO80Q9ULG1 1556 aaPredicted RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 RGS12O14924 1447 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 TMEM94Q12767 1356 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 PRC1O43663 620 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 ADAMTS2O95450 1211 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 DDIT3P35638 169 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 CDC37L1Q7L3B6 337 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.57□□□□□ -1.363e-9■■■□□ 16.3
SYNCRIP-204ENST00000616122 TECPR2O15040 1411 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 SERPINC1P01008 464 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 CFAP100Q494V2 611 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 MRPS27Q92552 414 aaKnown RBP6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 CCDC196A0A1B0GTZ2 297 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 LARGE1O95461 756 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 ANO6Q4KMQ2 910 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 OLFM4Q6UX06 510 aa6.57□□□□□ -1.36
SYNCRIP-204ENST00000616122 TTLL5Q6EMB2 1281 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 CLIP2Q9UDT6 1046 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 ALKQ9UM73 1620 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 LIG1P18858 919 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 OVOS2A0A0J9YW53 1432 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 OVOS2Q6IE36 1432 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 SH3TC1Q8TE82 1336 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 CD163L1Q9NR16 1453 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 GLI2P10070 1586 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 TCIRG1Q13488 830 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 ZNF589Q86UQ0 364 aaPredicted RBP6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 APPBP2Q92624 585 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 PDLIM2Q96JY6 352 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 SLAIN2Q9P270 581 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 TPM1P09493 284 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 CCAR1Q8IX12 1150 aaKnown RBP6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 NEXMIFQ5QGS0 1516 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 SHROOM2Q13796 1616 aa6.56□□□□□ -1.36
SYNCRIP-204ENST00000616122 CCDC69A6NI79 296 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 SPTLC2O15270 562 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 ZBTB43O43298 467 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 IPO7O95373 1038 aaKnown RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 BICDL1Q6ZP65 573 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 MNS1Q8NEH6 495 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 ANKRD20A12PQ8NF67 263 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 CPS1P31327 1500 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 NUTM2BA6NNL0 878 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 GOLGA8AA7E2F4 631 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 NUTM2EB1AL46 878 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 IRS4O14654 1257 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 UQCRFS1P1P0C7P4 283 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 PTPN14Q15678 1187 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 LRRC24Q50LG9 513 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 TMEM67Q5HYA8 995 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 NUTM2AQ8IVF1 878 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 KCNG4Q8TDN1 519 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 USP28Q96RU2 1077 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 SLC12A7Q9Y666 1083 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 LMOD1P29536 600 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 METAP2P50579 478 aaKnown RBP eCLIP6.55□□□□□ -1.369e-6■■■■□ 23.9
SYNCRIP-204ENST00000616122 C17orf53Q8N3J3 647 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 GTF3C6Q969F1 213 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 PRIMPOLQ96LW4 560 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 TNNT1P13805 278 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 TTF1Q15361 905 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 CCDC102BQ68D86 513 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 CCDC144CPQ8IYA2 1237 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 PPRC1Q5VV67 1664 aaKnown RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 GPAA1O43292 621 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 HSPD1P10809 573 aaKnown RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 SKILP12757 684 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 MARCKSP29966 332 aaPredicted RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 PUS3Q9BZE2 481 aaKnown RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 TRMT1Q9NXH9 659 aaKnown RBP6.55□□□□□ -1.36
SYNCRIP-204ENST00000616122 FAM160A1Q05DH4 1040 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 IQCA1Q86XH1 822 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 XAGE2Q96GT9 111 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 TTC14Q96N46 770 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 RNF41Q9H4P4 317 aaPredicted RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 SALL3Q9BXA9 1300 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 A0A1B0GVL5 298 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 MARCH6O60337 910 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 PTGS1P23219 599 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 ADCY9O60503 1353 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 PTPRUQ92729 1446 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 RANBP6O60518 1105 aaKnown RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 STX1AQ16623 288 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 TSR1Q2NL82 804 aaKnown RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 NAA16Q6N069 864 aaPredicted RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 GIGYF2Q6Y7W6 1299 aaKnown RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 NOL10Q9BSC4 688 aaKnown RBP6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 BRMS1Q9HCU9 246 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 HELLSQ9NRZ9 838 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 DYNC1I1O14576 645 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 SLC5A1P13866 664 aa6.54□□□□□ -1.36
SYNCRIP-204ENST00000616122 ISM2Q6H9L7 571 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms