RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FAM107BQ9H098 131 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
TCF4-248ENST00000616053 ACSBG1Q96GR2 724 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 NSRP1Q9H0G5 558 aaKnown RBP14.32□□□□□ -0.12
TCF4-248ENST00000616053 MGEA5O60502 916 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 PSMD6Q15008 389 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 RAB11FIP4Q86YS3 637 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 MYCP01106 439 aaPredicted RBP14.32□□□□□ -0.12
TCF4-248ENST00000616053 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 EYA3Q99504 573 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 RIMBP2O15034 1052 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 MAP7Q14244 749 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 SELENOOQ9BVL4 669 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 TMX1Q9H3N1 280 aa14.32□□□□□ -0.12
TCF4-248ENST00000616053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.12
TCF4-248ENST00000616053 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 KIF9Q9HAQ2 790 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 PYM1Q9BRP8 204 aaKnown RBP14.31□□□□□ -0.12
TCF4-248ENST00000616053 ATP6V0A2Q9Y487 856 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 TRPC3Q13507 836 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 ERCC6LQ2NKX8 1250 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 BIRC3Q13489 604 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 OTUD7BQ6GQQ9 843 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 TMEM67Q5HYA8 995 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 IL1RAPL2Q9NP60 686 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 USP25Q9UHP3 1055 aa14.31□□□□□ -0.12
TCF4-248ENST00000616053 BCAR3O75815 825 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 NBPF7P0C2Y1 421 aaPredicted RBP14.3□□□□□ -0.12
TCF4-248ENST00000616053 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 N4BP2L2Q92802 583 aaPredicted RBP14.3□□□□□ -0.12
TCF4-248ENST00000616053 UAP1Q16222 522 aaPredicted RBP14.3□□□□□ -0.12
TCF4-248ENST00000616053 NUF2Q9BZD4 464 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
TCF4-248ENST00000616053 EVI5LQ96CN4 794 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 HINFPQ9BQA5 517 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
TCF4-248ENST00000616053 SLC7A5P2Q9GIP4 190 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 KRT5P13647 590 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 WDR44Q5JSH3 913 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 PKD2L1Q9P0L9 805 aa14.3□□□□□ -0.12
TCF4-248ENST00000616053 LRPPRCP42704 1394 aaKnown RBP14.3□□□□□ -0.12
TCF4-248ENST00000616053 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 CCDC94Q9BW85 323 aaPredicted RBP14.29□□□□□ -0.12
TCF4-248ENST00000616053 GOLGA6CA6NDK9 693 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 GOLGA6DP0CG33 693 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 CDAN1Q8IWY9 1227 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 GOLGA6AQ9NYA3 693 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 MAP3K7O43318 606 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 KRT9P35527 623 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 MICAL1Q8TDZ2 1067 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 CAMK4Q16566 473 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 CEP120Q8N960 986 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 KRT33BQ14525 404 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
TCF4-248ENST00000616053 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
TCF4-248ENST00000616053 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 ABI1Q8IZP0 508 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 HS2ST1Q7LGA3 356 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 CARD10Q9BWT7 1032 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 DNM2P50570 870 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 CLUL1Q15846 466 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 PRKRIP1Q9H875 184 aaPredicted RBP14.28□□□□□ -0.12
TCF4-248ENST00000616053 TYW5A2RUC4 315 aaKnown RBP14.28□□□□□ -0.12
TCF4-248ENST00000616053 AKR1B10O60218 316 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 URI1O94763 535 aaPredicted RBP14.28□□□□□ -0.12
TCF4-248ENST00000616053 MRE11P49959 708 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 STMN4Q9H169 189 aaPredicted RBP14.28□□□□□ -0.12
TCF4-248ENST00000616053 AZI2Q9H6S1 392 aa14.28□□□□□ -0.12
TCF4-248ENST00000616053 IFT74Q96LB3 600 aa14.27□□□□□ -0.12
TCF4-248ENST00000616053 TBCCQ15814 346 aa14.27□□□□□ -0.12
TCF4-248ENST00000616053 GBP7Q8N8V2 638 aaPredicted RBP14.27□□□□□ -0.12
TCF4-248ENST00000616053 RNF217Q8TC41 542 aa14.27□□□□□ -0.12
TCF4-248ENST00000616053 TTC14Q96N46 770 aa14.27□□□□□ -0.12
TCF4-248ENST00000616053 INPP1P49441 399 aa14.27□□□□□ -0.12
TCF4-248ENST00000616053 ITIH3Q06033 890 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 STIM2Q9P246 746 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
TCF4-248ENST00000616053 MARCKSP29966 332 aaPredicted RBP14.27□□□□□ -0.13
TCF4-248ENST00000616053 CFAP36Q96G28 342 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 CALML3P27482 149 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 STRN3Q13033 797 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 SMARCC1Q92922 1105 aaPredicted RBP14.27□□□□□ -0.13
TCF4-248ENST00000616053 JAKMIP2Q96AA8 810 aa14.27□□□□□ -0.13
TCF4-248ENST00000616053 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms