RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TRIM5Q9C035 493 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 SCAND2PQ9GZW5 306 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 MRE11P49959 708 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 GNAQP50148 359 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 FERMT3Q86UX7 667 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 RNF214Q8ND24 703 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 RBM8AQ9Y5S9 174 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 RAD50Q92878 1312 aa10.99□□□□□ -0.65
CLTCL1-208ENST00000615606 SMC2O95347 1197 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 VEZTQ9HBM0 779 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 ANAPC15P60006 121 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 MAGEB6Q8N7X4 407 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 SMARCE1Q969G3 411 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 A0A1B0GUL7 405 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 TNNI2P48788 182 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 NAP1L1P55209 391 aaKnown RBP10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 KRT27Q7Z3Y8 459 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 MAST3O60307 1309 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 DPP8Q6V1X1 898 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 CCAR2Q8N163 923 aaKnown RBP10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 SUCLG2Q96I99 432 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 CCDC39Q9UFE4 941 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 WWC3Q9ULE0 1092 aa10.98□□□□□ -0.65
CLTCL1-208ENST00000615606 PDE6BP35913 854 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 TNNI3KQ59H18 835 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 ODF2Q5BJF6 829 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 IFIT1BQ5T764 474 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 NUP62CLQ9H1M0 184 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 ORC3Q9UBD5 711 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 FPGT-TNNI3KV9GXZ4 949 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 CAMSAP1Q5T5Y3 1602 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 CDK12Q9NYV4 1490 aaPredicted RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 MROH5Q6ZUA9 1318 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 KCNQ3O43525 872 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 BAG4O95429 457 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 MPHOSPH6Q99547 160 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 NEURL1BA8MQ27 555 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 ZBTB43O43298 467 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 DHX8Q14562 1220 aaKnown RBP10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 SYCP1Q15431 976 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 GOLGA6L1Q8N7Z2 621 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 LPIN2Q92539 896 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 VAT1LQ9HCJ6 419 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 MCM9Q9NXL9 1143 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 CEP152O94986 1710 aa10.97□□□□□ -0.65
CLTCL1-208ENST00000615606 INO80Q9ULG1 1556 aaPredicted RBP10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 KLF18A0A0U1RQI7 1052 aa10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 CERS3Q8IU89 383 aa10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 CLTCQ00610 1675 aaKnown RBP10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 KDRP35968 1356 aa10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 TTC6Q86TZ1 520 aa10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 WDR66Q8TBY9 1149 aa10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 PLEKHF1Q96S99 279 aa10.96□□□□□ -0.65
CLTCL1-208ENST00000615606 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.66
CLTCL1-208ENST00000615606 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.66
CLTCL1-208ENST00000615606 BRF1Q92994 677 aa10.96□□□□□ -0.66
CLTCL1-208ENST00000615606 PRM3Q9NNZ6 103 aa10.96□□□□□ -0.66
CLTCL1-208ENST00000615606 ARHGEF40Q8TER5 1519 aa10.96□□□□□ -0.66
CLTCL1-208ENST00000615606 GUCY1B3Q02153 619 aa10.96□□□□□ -0.66
CLTCL1-208ENST00000615606 SERPINC1P01008 464 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 PPP4R3AQ6IN85 833 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 CCDC144CPQ8IYA2 1237 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 ZNF592Q92610 1267 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 SLC26A6Q9BXS9 759 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 HELLSQ9NRZ9 838 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 TNS3Q68CZ2 1445 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 IL6STP40189 918 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 TIMM10P62072 90 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 XAGE2Q96GT9 111 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 ZNHIT6Q9NWK9 470 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 CALM1P0DP23 149 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 CALM2P0DP24 149 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 CALM3P0DP25 149 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 CCDC171Q6TFL3 1326 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 MAP3K15Q6ZN16 1313 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 NBPF7P0C2Y1 421 aaPredicted RBP10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 TBC1D32Q96NH3 1257 aa10.95□□□□□ -0.66
CLTCL1-208ENST00000615606 TULP4Q9NRJ4 1543 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 AOX1Q06278 1338 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 GJB2P29033 226 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 CRKLP46109 303 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 RPS8P62241 208 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 RTN1Q16799 776 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 TANGO6Q9C0B7 1094 aa10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
CLTCL1-208ENST00000615606 ASAP1Q9ULH1 1129 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms