RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-223ENST00000615442 EYA2O00167 538 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 HMMRO75330 724 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 GPSM2P81274 684 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
PVT1-223ENST00000615442 KLHDC4Q8TBB5 520 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 RTFDC1Q9BY42 306 aaPredicted RBP13.06□□□□□ -0.32
PVT1-223ENST00000615442 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 MROH5Q6ZUA9 1318 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
PVT1-223ENST00000615442 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 NFKBIEO00221 500 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 ATP2B4P23634 1241 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 CHRNDQ07001 517 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 LRRC24Q50LG9 513 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
PVT1-223ENST00000615442 TAOK3Q9H2K8 898 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 LEMD3Q9Y2U8 911 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 XDHP47989 1333 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 COL4A1P02462 1669 aa13.05□□□□□ -0.32
PVT1-223ENST00000615442 MYH3P11055 1940 aa13.04□□□□□ -0.32
PVT1-223ENST00000615442 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
PVT1-223ENST00000615442 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
PVT1-223ENST00000615442 ATG9AQ7Z3C6 839 aa13.04□□□□□ -0.32
PVT1-223ENST00000615442 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
PVT1-223ENST00000615442 SIRT2Q8IXJ6 389 aa13.04□□□□□ -0.32
PVT1-223ENST00000615442 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
PVT1-223ENST00000615442 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
PVT1-223ENST00000615442 NOP58Q9Y2X3 529 aaKnown RBP13.04□□□□□ -0.32
PVT1-223ENST00000615442 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
PVT1-223ENST00000615442 PDE8BO95263 885 aa13.03□□□□□ -0.32
PVT1-223ENST00000615442 METTL24Q5JXM2 366 aa13.03□□□□□ -0.32
PVT1-223ENST00000615442 EYA3Q99504 573 aa13.03□□□□□ -0.32
PVT1-223ENST00000615442 SIL1Q9H173 461 aa13.03□□□□□ -0.32
PVT1-223ENST00000615442 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
PVT1-223ENST00000615442 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
PVT1-223ENST00000615442 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
PVT1-223ENST00000615442 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.32
PVT1-223ENST00000615442 C6orf229H3BNL8 230 aa13.02□□□□□ -0.33
PVT1-223ENST00000615442 LMNB1P20700 586 aa13.02□□□□□ -0.33
PVT1-223ENST00000615442 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
PVT1-223ENST00000615442 HSP90AB4PQ58FF6 505 aa13.02□□□□□ -0.33
PVT1-223ENST00000615442 CEP126Q9P2H0 1117 aa13.02□□□□□ -0.33
PVT1-223ENST00000615442 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.33
PVT1-223ENST00000615442 TAF5LO75529 589 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 UFL1O94874 794 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 IARSP41252 1262 aaKnown RBP13.01□□□□□ -0.33
PVT1-223ENST00000615442 KCNJ4P48050 445 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 RASSF7Q02833 373 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 UBE4AQ14139 1066 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 VGLL2Q8N8G2 317 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
PVT1-223ENST00000615442 ZC3H12CQ9C0D7 883 aaKnown RBP13.01□□□□□ -0.33
PVT1-223ENST00000615442 ZNF277Q9NRM2 450 aaPredicted RBP13.01□□□□□ -0.33
PVT1-223ENST00000615442 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
PVT1-223ENST00000615442 TAF1P21675 1872 aa13□□□□□ -0.33
PVT1-223ENST00000615442 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
PVT1-223ENST00000615442 C15orf52Q6ZUT6 534 aaKnown RBP13□□□□□ -0.33
PVT1-223ENST00000615442 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
PVT1-223ENST00000615442 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
PVT1-223ENST00000615442 PPIP5K2O43314 1243 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 SASH1O94885 1247 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 NEFLP07196 543 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 PRELPP51888 382 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
PVT1-223ENST00000615442 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
PVT1-223ENST00000615442 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
PVT1-223ENST00000615442 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 JDP2Q8WYK2 163 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 SRCAPQ6ZRS2 3230 aa12.99□□□□□ -0.33
PVT1-223ENST00000615442 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 FGFR2P21802 821 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 TFCP2Q12800 502 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 AOC3Q16853 763 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 LARGE2Q8N3Y3 721 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 LPIN2Q92539 896 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
PVT1-223ENST00000615442 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 RNF181Q9P0P0 153 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
PVT1-223ENST00000615442 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
PVT1-223ENST00000615442 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
PVT1-223ENST00000615442 IFIT1P09914 478 aaKnown RBP12.97□□□□□ -0.33
PVT1-223ENST00000615442 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
PVT1-223ENST00000615442 CACNA1SQ13698 1873 aa12.97□□□□□ -0.33
PVT1-223ENST00000615442 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
PVT1-223ENST00000615442 LTBP1Q14766 1721 aa12.96□□□□□ -0.33
PVT1-223ENST00000615442 G3V3G9 751 aa12.96□□□□□ -0.33
PVT1-223ENST00000615442 SNAP23O00161 211 aa12.96□□□□□ -0.33
PVT1-223ENST00000615442 SLC5A1P13866 664 aa12.96□□□□□ -0.33
PVT1-223ENST00000615442 ATP2B3Q16720 1220 aa12.96□□□□□ -0.33
PVT1-223ENST00000615442 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
PVT1-223ENST00000615442 PODNQ7Z5L7 613 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms