RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
MMP28-205ENST00000615317 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
MMP28-205ENST00000615317 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
MMP28-205ENST00000615317 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
MMP28-205ENST00000615317 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
MMP28-205ENST00000615317 CIAO1O76071 339 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 KCNA3P22001 575 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 RPS8P62241 208 aaKnown RBP11.28□□□□□ -0.6
MMP28-205ENST00000615317 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 CNKSR1Q969H4 720 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 RWDD1Q9H446 243 aaPredicted RBP11.28□□□□□ -0.6
MMP28-205ENST00000615317 PSME4Q14997 1843 aa11.28□□□□□ -0.6
MMP28-205ENST00000615317 ALDH1B1P30837 517 aa11.27□□□□□ -0.61
MMP28-205ENST00000615317 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
MMP28-205ENST00000615317 CHRNDQ07001 517 aa11.27□□□□□ -0.61
MMP28-205ENST00000615317 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.61
MMP28-205ENST00000615317 TTLL6Q8N841 843 aa11.27□□□□□ -0.61
MMP28-205ENST00000615317 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
MMP28-205ENST00000615317 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
MMP28-205ENST00000615317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
MMP28-205ENST00000615317 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
MMP28-205ENST00000615317 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 SBF1O95248 1867 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 SMARCA5O60264 1052 aaPredicted RBP11.26□□□□□ -0.61
MMP28-205ENST00000615317 TAF5LO75529 589 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 TFCP2Q12800 502 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
MMP28-205ENST00000615317 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
MMP28-205ENST00000615317 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
MMP28-205ENST00000615317 DCTPP1Q9H773 170 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
MMP28-205ENST00000615317 PIM2Q9P1W9 311 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
MMP28-205ENST00000615317 MROH5Q6ZUA9 1318 aa11.26□□□□□ -0.61
MMP28-205ENST00000615317 C21orf2O43822 256 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 SASH1O94885 1247 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 GPSM2P81274 684 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 HSP90AB4PQ58FF6 505 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 CENPQQ7L2Z9 268 aaPredicted RBP11.25□□□□□ -0.61
MMP28-205ENST00000615317 TMC4Q7Z404 712 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
MMP28-205ENST00000615317 LRRCC1Q9C099 1032 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 ATP6V0A2Q9Y487 856 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 XDHP47989 1333 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 MYH7P12883 1935 aa11.25□□□□□ -0.61
MMP28-205ENST00000615317 COL4A5P29400 1685 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 SNAP23O00161 211 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 BBOX1O75936 387 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 UFL1O94874 794 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 KLRK1P26718 216 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 KCNJ4P48050 445 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 ATP2B3Q16720 1220 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 TLR7Q9NYK1 1049 aaKnown RBP11.24□□□□□ -0.61
MMP28-205ENST00000615317 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 CHD4Q14839 1912 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 AKAP11Q9UKA4 1901 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 SCN9AQ15858 1988 aa11.24□□□□□ -0.61
MMP28-205ENST00000615317 MYO5AQ9Y4I1 1855 aaKnown RBP11.23□□□□□ -0.61
MMP28-205ENST00000615317 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 PUM3Q15397 648 aaKnown RBP11.23□□□□□ -0.61
MMP28-205ENST00000615317 TNNI3KQ59H18 835 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
MMP28-205ENST00000615317 AACSQ86V21 672 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 SKAP1Q86WV1 359 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 LNPKQ9C0E8 428 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 ANKRD2Q9GZV1 360 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 TMX4Q9H1E5 349 aaPredicted RBP11.23□□□□□ -0.61
MMP28-205ENST00000615317 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
MMP28-205ENST00000615317 FPGT-TNNI3KV9GXZ4 949 aa11.23□□□□□ -0.61
MMP28-205ENST00000615317 COL1A1P02452 1464 aaPredicted RBP11.23□□□□□ -0.61
MMP28-205ENST00000615317 A0A1B0GUL7 405 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 PDE8BO95263 885 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
MMP28-205ENST00000615317 ADORA1P30542 326 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 RASSF7Q02833 373 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 ADAMTSL1Q8N6G6 1762 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 C7orf43Q8WVR3 580 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
MMP28-205ENST00000615317 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
MMP28-205ENST00000615317 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
MMP28-205ENST00000615317 SLC5A1P13866 664 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms