RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 KCNG4Q8TDN1 519 aa15.24■□□□□ 0.03
TRAK1-210ENST00000613405 C19orf44Q9H6X5 657 aa15.24■□□□□ 0.03
TRAK1-210ENST00000613405 U2AF2P26368 475 aaKnown RBP eCLIP15.23■□□□□ 0.033e-10■■■■■ 44.2
TRAK1-210ENST00000613405 SSRP1Q08945 709 aaKnown RBP15.23■□□□□ 0.03
TRAK1-210ENST00000613405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAK1-210ENST00000613405 SYT10Q6XYQ8 523 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 MSH6P52701 1360 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 ZPR1O75312 459 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 CACNA2D4Q7Z3S7 1137 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 RSPH14Q9UHP6 348 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 GAS2L3Q86XJ1 694 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 TMEM63CQ9P1W3 806 aa15.23■□□□□ 0.03
TRAK1-210ENST00000613405 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 SEPT11Q9NVA2 429 aaKnown RBP15.22■□□□□ 0.03
TRAK1-210ENST00000613405 CCDC144CPQ8IYA2 1237 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 N4BP3O15049 544 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 MNAT1P51948 309 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 IVLP07476 585 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 SEPT7Q16181 437 aaKnown RBP15.22■□□□□ 0.03
TRAK1-210ENST00000613405 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
TRAK1-210ENST00000613405 Q6ZUG5 572 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 PPP1R9BQ96SB3 815 aa15.22■□□□□ 0.03
TRAK1-210ENST00000613405 CTAGE15A4D2H0 777 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 CTAGE8P0CG41 777 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 CPA1P15085 419 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 CAPN2P17655 700 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 RBM5P52756 815 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRAK1-210ENST00000613405 CTAGE6Q86UF2 777 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 IQCA1Q86XH1 822 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 ZSCAN29Q8IWY8 852 aaPredicted RBP15.21■□□□□ 0.03
TRAK1-210ENST00000613405 CTAGE4Q8IX94 777 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 TRPM2O94759 1503 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 SBNO2Q9Y2G9 1366 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 ATP10AO60312 1499 aa15.21■□□□□ 0.03
TRAK1-210ENST00000613405 KLF18A0A0U1RQI7 1052 aa15.21■□□□□ 0.02
TRAK1-210ENST00000613405 USP5P45974 858 aa15.21■□□□□ 0.02
TRAK1-210ENST00000613405 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.02
TRAK1-210ENST00000613405 TSC1Q92574 1164 aa15.21■□□□□ 0.02
TRAK1-210ENST00000613405 GTF3C6Q969F1 213 aa15.21■□□□□ 0.02
TRAK1-210ENST00000613405 RNMTO43148 476 aaKnown RBP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 MKNK2Q9HBH9 465 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 JADE2Q9NQC1 790 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 IFNKQ9P0W0 207 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 METAP2P50579 478 aaKnown RBP eCLIP15.2■□□□□ 0.025e-7■■■■■ 29.1
TRAK1-210ENST00000613405 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 CTCFLQ8NI51 663 aaPredicted RBP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 DDX21Q9NR30 783 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.023e-8■■■■■ 29.8
TRAK1-210ENST00000613405 TDRD12Q587J7 1177 aaKnown RBP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 LGR6Q9HBX8 967 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 MARCKSP29966 332 aaPredicted RBP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 NMIQ13287 307 aaPredicted RBP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 HLTFQ14527 1009 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 DZIP1Q86YF9 867 aaKnown RBP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 ERO1AQ96HE7 468 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 CCDC113Q9H0I3 377 aa15.2■□□□□ 0.02
TRAK1-210ENST00000613405 BCCIPQ9P287 314 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAK1-210ENST00000613405 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 NCOA7Q8NI08 942 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 ANKIB1Q9P2G1 1089 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 TTC41PQ6P2S7 1318 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 SBNO1A3KN83 1393 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 GADD45BO75293 160 aaPredicted RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 DYDC1Q8WWB3 177 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 FSD2A1L4K1 749 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 GOLGA1Q92805 767 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 ZNF500O60304 480 aaPredicted RBP15.19■□□□□ 0.02
TRAK1-210ENST00000613405 MCMDC2Q4G0Z9 681 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 TMEM67Q5HYA8 995 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 ZBTB9Q96C00 473 aa15.19■□□□□ 0.02
TRAK1-210ENST00000613405 SPTLC2O15270 562 aa15.18■□□□□ 0.02
TRAK1-210ENST00000613405 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
TRAK1-210ENST00000613405 SLC26A6Q9BXS9 759 aa15.18■□□□□ 0.02
TRAK1-210ENST00000613405 ABCA8O94911 1581 aa15.18■□□□□ 0.02
TRAK1-210ENST00000613405 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
TRAK1-210ENST00000613405 HSPA2P54652 639 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
TRAK1-210ENST00000613405 CCDC178Q5BJE1 867 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 FAM173BQ6P4H8 233 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 NAA15Q9BXJ9 866 aaKnown RBP15.17■□□□□ 0.02
TRAK1-210ENST00000613405 PNMA6EA0A0J9YXQ4 647 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 CCDC175P0C221 793 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 ZRSR2Q15696 482 aaKnown RBP15.17■□□□□ 0.02
TRAK1-210ENST00000613405 RUFY3Q7L099 469 aa15.17■□□□□ 0.02
TRAK1-210ENST00000613405 ALG1Q9BT22 464 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms