RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 TNPO1Q92973 898 aaKnown RBP10.13□□□□□ -0.79
PDE6A-204ENST00000613228 FEZ1Q99689 392 aa10.13□□□□□ -0.79
PDE6A-204ENST00000613228 FAM107BQ9H098 131 aa10.13□□□□□ -0.79
PDE6A-204ENST00000613228 ANKIB1Q9P2G1 1089 aa10.13□□□□□ -0.79
PDE6A-204ENST00000613228 THRAP3Q9Y2W1 955 aaKnown RBP10.13□□□□□ -0.79
PDE6A-204ENST00000613228 EYA2O00167 538 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 IRS4O14654 1257 aaPredicted RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 CCDC91Q7Z6B0 441 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 NBPF5PQ86XG9 351 aaPredicted RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 ERBB3P21860 1342 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 IBTKQ9P2D0 1353 aaPredicted RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 PDE8AO60658 829 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 SLC12A7Q9Y666 1083 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 CAVIN2O95810 425 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 SSFA2P28290 1259 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 FOSBP53539 338 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 SSRP1Q08945 709 aaKnown RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 CRNKL1Q9BZJ0 848 aaKnown RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 SPATA31A3Q5VYP0 1347 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 SMTNL1A8MU46 457 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 USP5P45974 858 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 GABPB1Q06547 395 aaPredicted RBP10.12□□□□□ -0.79
PDE6A-204ENST00000613228 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 FER1L4A9Z1Z3 1794 aa10.12□□□□□ -0.79
PDE6A-204ENST00000613228 NMIQ13287 307 aaPredicted RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 ERCC4Q92889 916 aaPredicted RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 RBM8AQ9Y5S9 174 aaKnown RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 DCCP43146 1447 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 STX6O43752 255 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 ME1P48163 572 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 TFCP2Q12800 502 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 TNNI3KQ59H18 835 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 BEND3Q5T5X7 828 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 TMX3Q96JJ7 454 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 TMOD2Q9NZR1 351 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 FPGT-TNNI3KV9GXZ4 949 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 IPO7O95373 1038 aaKnown RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 PDE4BQ07343 736 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 KRT222Q8N1A0 295 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 NEURL1BA8MQ27 555 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 TPTE2Q6XPS3 522 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 SKAP1Q86WV1 359 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 CCDC85AQ96PX6 553 aaPredicted RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 OGFRQ9NZT2 677 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 NIP7Q9Y221 180 aaKnown RBP eCLIP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
PDE6A-204ENST00000613228 CCDC171Q6TFL3 1326 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 MROH5Q6ZUA9 1318 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 GJB2P29033 226 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 KIF5BP33176 963 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 MAP3K11Q16584 847 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 ZNF804AQ7Z570 1209 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 CATIPQ7Z7H3 387 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 NUP133Q8WUM0 1156 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 C8orf76Q96K31 380 aa10.11□□□□□ -0.79
PDE6A-204ENST00000613228 MYCBPQ99417 103 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 RASSF4Q9H2L5 321 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 GPR108Q9NPR9 543 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 RIMS1Q86UR5 1692 aaKnown RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 CTCFLQ8NI51 663 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 PAIP2Q9BPZ3 127 aaKnown RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 ABCF2Q9UG63 623 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 GOLGA8AA7E2F4 631 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 GOLGA8BA8MQT2 603 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 STIM1Q13586 685 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 KLHL40Q2TBA0 621 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 ATL3Q6DD88 541 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 MFSD6Q6ZSS7 791 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 BANK1Q8NDB2 785 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 CCDC12Q8WUD4 166 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 PLCD4Q9BRC7 762 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 RTL9Q8NET4 1388 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 UVSSAQ2YD98 709 aa10.1□□□□□ -0.79
PDE6A-204ENST00000613228 DHX37Q8IY37 1157 aaKnown RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
PDE6A-204ENST00000613228 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 PES1O00541 588 aaKnown RBP10.09□□□□□ -0.79
PDE6A-204ENST00000613228 RAD21O60216 631 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 SMC2O95347 1197 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 BMP15O95972 392 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CCDC70Q6NSX1 233 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 SUCLG2Q96I99 432 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 STAP2Q9UGK3 403 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 C1orf167Q5SNV9 1468 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CALM1P0DP23 149 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CALM2P0DP24 149 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CALM3P0DP25 149 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 DNAJC5Q9H3Z4 198 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms