RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 AKAP11Q9UKA4 1901 aa30.6■■■□□ 2.49
MMP28-203ENST00000612672 RGMBQ6NW40 437 aa30.59■■■□□ 2.49
MMP28-203ENST00000612672 SEC31BQ9NQW1 1179 aa30.58■■■□□ 2.49
MMP28-203ENST00000612672 ZNF646O15015 1829 aaPredicted RBP30.57■■■□□ 2.48
MMP28-203ENST00000612672 IRS4O14654 1257 aaPredicted RBP30.57■■■□□ 2.48
MMP28-203ENST00000612672 RPS12P25398 132 aaKnown RBP30.57■■■□□ 2.48
MMP28-203ENST00000612672 RALBP1Q15311 655 aa30.57■■■□□ 2.48
MMP28-203ENST00000612672 HOXB7P09629 217 aa30.56■■■□□ 2.48
MMP28-203ENST00000612672 KIF23Q02241 960 aaPredicted RBP30.56■■■□□ 2.48
MMP28-203ENST00000612672 KIF4BQ2VIQ3 1234 aa30.56■■■□□ 2.48
MMP28-203ENST00000612672 DBF4Q9UBU7 674 aaPredicted RBP30.56■■■□□ 2.48
MMP28-203ENST00000612672 PDE4DIPQ5VU43 2346 aa30.56■■■□□ 2.48
MMP28-203ENST00000612672 GGA3Q9NZ52 723 aa30.55■■■□□ 2.48
MMP28-203ENST00000612672 RPS8P62241 208 aaKnown RBP30.54■■■□□ 2.48
MMP28-203ENST00000612672 TRIM28Q13263 835 aaKnown RBP30.54■■■□□ 2.48
MMP28-203ENST00000612672 DUSP27Q5VZP5 1158 aa30.54■■■□□ 2.48
MMP28-203ENST00000612672 VIL1P09327 827 aaKnown RBP30.53■■■□□ 2.48
MMP28-203ENST00000612672 DCPSQ96C86 337 aaKnown RBP30.53■■■□□ 2.48
MMP28-203ENST00000612672 EYA3Q99504 573 aa30.53■■■□□ 2.48
MMP28-203ENST00000612672 SPEF2Q9C093 1822 aa30.52■■■□□ 2.48
MMP28-203ENST00000612672 C2orf69Q8N8R5 385 aa30.52■■■□□ 2.48
MMP28-203ENST00000612672 RUNDC1Q96C34 613 aa30.52■■■□□ 2.48
MMP28-203ENST00000612672 PODXL2Q9NZ53 605 aa30.52■■■□□ 2.48
MMP28-203ENST00000612672 ZNF609O15014 1411 aa30.51■■■□□ 2.47
MMP28-203ENST00000612672 SLC10A3P09131 477 aa30.51■■■□□ 2.47
MMP28-203ENST00000612672 ZNF157P51786 506 aaPredicted RBP30.51■■■□□ 2.47
MMP28-203ENST00000612672 CDCA5Q96FF9 252 aa30.51■■■□□ 2.47
MMP28-203ENST00000612672 PHAXQ9H814 394 aaKnown RBP30.51■■■□□ 2.47
MMP28-203ENST00000612672 MBIPQ9NS73 344 aa30.51■■■□□ 2.47
MMP28-203ENST00000612672 HYPKQ9NX55 129 aa30.51■■■□□ 2.47
MMP28-203ENST00000612672 RNF186Q9NXI6 227 aa30.51■■■□□ 2.47
MMP28-203ENST00000612672 MYBBP1AQ9BQG0 1328 aaKnown RBP30.5■■■□□ 2.47
MMP28-203ENST00000612672 UFL1O94874 794 aa30.5■■■□□ 2.47
MMP28-203ENST00000612672 JARID2Q92833 1246 aaPredicted RBP30.5■■■□□ 2.47
MMP28-203ENST00000612672 SAGE1Q9NXZ1 904 aa30.5■■■□□ 2.47
MMP28-203ENST00000612672 TRPA1O75762 1119 aa30.49■■■□□ 2.47
MMP28-203ENST00000612672 ZBTB38Q8NAP3 1195 aaPredicted RBP30.48■■■□□ 2.47
MMP28-203ENST00000612672 CCDC102AQ96A19 550 aa30.48■■■□□ 2.47
MMP28-203ENST00000612672 CSRNP1Q96S65 589 aa30.48■■■□□ 2.47
MMP28-203ENST00000612672 ADAMTS8Q9UP79 889 aa30.48■■■□□ 2.47
MMP28-203ENST00000612672 PAPPA2Q9BXP8 1791 aa30.48■■■□□ 2.47
MMP28-203ENST00000612672 WTIPA6NIX2 430 aaPredicted RBP30.47■■■□□ 2.47
MMP28-203ENST00000612672 ZNF280AP59817 542 aaPredicted RBP30.47■■■□□ 2.47
MMP28-203ENST00000612672 CCDC85AQ96PX6 553 aaPredicted RBP30.47■■■□□ 2.47
MMP28-203ENST00000612672 ZC3H12CQ9C0D7 883 aaKnown RBP30.47■■■□□ 2.47
MMP28-203ENST00000612672 SCAF8Q9UPN6 1271 aaKnown RBP30.47■■■□□ 2.47
MMP28-203ENST00000612672 ANGEL2Q5VTE6 544 aaKnown RBP30.46■■■□□ 2.47
MMP28-203ENST00000612672 RASAL3Q86YV0 1011 aa30.46■■■□□ 2.47
MMP28-203ENST00000612672 MYD88Q99836 296 aa30.46■■■□□ 2.47
MMP28-203ENST00000612672 ZNF853P0CG23 659 aa30.45■■■□□ 2.47
MMP28-203ENST00000612672 RSBN1LQ6PCB5 846 aaPredicted RBP30.45■■■□□ 2.47
MMP28-203ENST00000612672 RIC3Q7Z5B4 369 aa30.45■■■□□ 2.47
MMP28-203ENST00000612672 SULF1Q8IWU6 871 aa30.45■■■□□ 2.47
MMP28-203ENST00000612672 GMLQ99445 158 aa30.45■■■□□ 2.47
MMP28-203ENST00000612672 GGA1Q9UJY5 639 aa30.45■■■□□ 2.47
MMP28-203ENST00000612672 SOX10P56693 466 aa30.44■■■□□ 2.46
MMP28-203ENST00000612672 SCARF1Q14162 830 aa30.44■■■□□ 2.46
MMP28-203ENST00000612672 ANKIB1Q9P2G1 1089 aa30.44■■■□□ 2.46
MMP28-203ENST00000612672 MYH3P11055 1940 aa30.43■■■□□ 2.46
MMP28-203ENST00000612672 MOB2Q70IA6 237 aa30.42■■■□□ 2.46
MMP28-203ENST00000612672 ELL2O00472 640 aaPredicted RBP30.41■■■□□ 2.46
MMP28-203ENST00000612672 PCCAP05165 728 aaPredicted RBP30.41■■■□□ 2.46
MMP28-203ENST00000612672 GOLGA2Q08379 1002 aa30.41■■■□□ 2.46
MMP28-203ENST00000612672 WDR43Q15061 677 aaKnown RBP eCLIP30.41■■■□□ 2.46
MMP28-203ENST00000612672 AGBL3Q8NEM8 1001 aa30.4■■■□□ 2.46
MMP28-203ENST00000612672 DDX10Q13206 875 aaKnown RBP30.39■■■□□ 2.46
MMP28-203ENST00000612672 CCDC152Q4G0S7 254 aa30.39■■■□□ 2.46
MMP28-203ENST00000612672 MYOZ2Q9NPC6 264 aa30.39■■■□□ 2.46
MMP28-203ENST00000612672 PDE8AO60658 829 aa30.38■■■□□ 2.45
MMP28-203ENST00000612672 CCDC191Q8NCU4 936 aa30.38■■■□□ 2.45
MMP28-203ENST00000612672 MXD3Q9BW11 206 aa30.38■■■□□ 2.45
MMP28-203ENST00000612672 G3V3G9 751 aa30.37■■■□□ 2.45
MMP28-203ENST00000612672 DCAF8Q5TAQ9 597 aa30.37■■■□□ 2.45
MMP28-203ENST00000612672 C8orf58Q8NAV2 365 aa30.37■■■□□ 2.45
MMP28-203ENST00000612672 XDHP47989 1333 aa30.37■■■□□ 2.45
MMP28-203ENST00000612672 PRAMEF18Q5VWM3 479 aa30.36■■■□□ 2.45
MMP28-203ENST00000612672 CWC25Q9NXE8 425 aaPredicted RBP30.36■■■□□ 2.45
MMP28-203ENST00000612672 HTTP42858 3142 aa30.36■■■□□ 2.45
MMP28-203ENST00000612672 USP17L8P0C7I0 530 aa30.35■■■□□ 2.45
MMP28-203ENST00000612672 PITPNM2Q9BZ72 1349 aa30.34■■■□□ 2.45
MMP28-203ENST00000612672 NBPF9Q3BBW0 867 aa30.34■■■□□ 2.45
MMP28-203ENST00000612672 METTL22Q9BUU2 404 aaPredicted RBP30.34■■■□□ 2.45
MMP28-203ENST00000612672 IFT57Q9NWB7 429 aa30.34■■■□□ 2.45
MMP28-203ENST00000612672 USP17L3A6NCW0 530 aa30.33■■■□□ 2.45
MMP28-203ENST00000612672 USP17L4A6NCW7 530 aa30.33■■■□□ 2.45
MMP28-203ENST00000612672 USP17L1Q7RTZ2 530 aa30.33■■■□□ 2.45
MMP28-203ENST00000612672 CTU1Q7Z7A3 348 aaKnown RBP30.33■■■□□ 2.45
MMP28-203ENST00000612672 ANKRD18AQ8IVF6 992 aa30.33■■■□□ 2.45
MMP28-203ENST00000612672 UBE2Q2LH0YL09 131 aa30.32■■■□□ 2.44
MMP28-203ENST00000612672 MED23Q9ULK4 1368 aa30.31■■■□□ 2.44
MMP28-203ENST00000612672 APAF1O14727 1248 aa30.31■■■□□ 2.44
MMP28-203ENST00000612672 IGKV5-2P06315 115 aa30.31■■■□□ 2.44
MMP28-203ENST00000612672 ATP2B4P23634 1241 aa30.31■■■□□ 2.44
MMP28-203ENST00000612672 CTSWP56202 376 aa30.3■■■□□ 2.44
MMP28-203ENST00000612672 FKBP1BP68106 108 aa30.3■■■□□ 2.44
MMP28-203ENST00000612672 HSP90B1P14625 803 aaKnown RBP30.29■■■□□ 2.44
MMP28-203ENST00000612672 DACT2Q5SW24 774 aa30.29■■■□□ 2.44
MMP28-203ENST00000612672 PODNQ7Z5L7 613 aa30.29■■■□□ 2.44
MMP28-203ENST00000612672 TSPYL6Q8N831 410 aa30.29■■■□□ 2.44
MMP28-203ENST00000612672 GREM2Q9H772 168 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms