RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 EYA2O00167 538 aa15.85■□□□□ 0.13
PRKN-210ENST00000612540 RAB11FIP3O75154 756 aa15.85■□□□□ 0.13
PRKN-210ENST00000612540 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
PRKN-210ENST00000612540 LDHAL6AQ6ZMR3 332 aa15.85■□□□□ 0.13
PRKN-210ENST00000612540 ARHGAP27Q6ZUM4 889 aa15.85■□□□□ 0.13
PRKN-210ENST00000612540 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
PRKN-210ENST00000612540 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
PRKN-210ENST00000612540 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.13
PRKN-210ENST00000612540 PUS3Q9BZE2 481 aaKnown RBP15.85■□□□□ 0.13
PRKN-210ENST00000612540 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
PRKN-210ENST00000612540 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
PRKN-210ENST00000612540 NPR1P16066 1061 aa15.84■□□□□ 0.13
PRKN-210ENST00000612540 CHRNA5P30532 468 aa15.84■□□□□ 0.13
PRKN-210ENST00000612540 GRAPQ13588 217 aa15.84■□□□□ 0.13
PRKN-210ENST00000612540 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
PRKN-210ENST00000612540 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
PRKN-210ENST00000612540 PIM2Q9P1W9 311 aa15.84■□□□□ 0.13
PRKN-210ENST00000612540 PDZRN3Q9UPQ7 1066 aa15.84■□□□□ 0.13
PRKN-210ENST00000612540 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
PRKN-210ENST00000612540 CIAO1O76071 339 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 SRGNP10124 158 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 HSPA6P17066 643 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 IL15P40933 162 aaPredicted RBP15.83■□□□□ 0.12
PRKN-210ENST00000612540 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.12
PRKN-210ENST00000612540 METTL24Q5JXM2 366 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 MASTLQ96GX5 879 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 LNPKQ9C0E8 428 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 IL1RAPL2Q9NP60 686 aa15.83■□□□□ 0.12
PRKN-210ENST00000612540 ATG9AQ7Z3C6 839 aa15.82■□□□□ 0.12
PRKN-210ENST00000612540 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
PRKN-210ENST00000612540 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
PRKN-210ENST00000612540 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
PRKN-210ENST00000612540 A0A1B0GUL6 1792 aa15.82■□□□□ 0.12
PRKN-210ENST00000612540 HOXA10P31260 410 aaPredicted RBP15.81■□□□□ 0.12
PRKN-210ENST00000612540 NUCB1Q02818 461 aa15.81■□□□□ 0.12
PRKN-210ENST00000612540 TFCP2Q12800 502 aa15.81■□□□□ 0.12
PRKN-210ENST00000612540 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
PRKN-210ENST00000612540 STYK1Q6J9G0 422 aa15.81■□□□□ 0.12
PRKN-210ENST00000612540 CHD1LQ86WJ1 897 aa15.81■□□□□ 0.12
PRKN-210ENST00000612540 CEP126Q9P2H0 1117 aa15.81■□□□□ 0.12
PRKN-210ENST00000612540 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
PRKN-210ENST00000612540 MROH5Q6ZUA9 1318 aa15.8■□□□□ 0.12
PRKN-210ENST00000612540 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
PRKN-210ENST00000612540 SASH1O94885 1247 aa15.8■□□□□ 0.12
PRKN-210ENST00000612540 HELBQ8NG08 1087 aaPredicted RBP15.8■□□□□ 0.12
PRKN-210ENST00000612540 BSDC1Q9NW68 430 aaPredicted RBP15.8■□□□□ 0.12
PRKN-210ENST00000612540 ALDH1B1P30837 517 aa15.79■□□□□ 0.12
PRKN-210ENST00000612540 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
PRKN-210ENST00000612540 CLASRPQ8N2M8 674 aaKnown RBP15.79■□□□□ 0.12
PRKN-210ENST00000612540 CNKSR1Q969H4 720 aa15.79■□□□□ 0.12
PRKN-210ENST00000612540 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
PRKN-210ENST00000612540 SLX4Q8IY92 1834 aa15.79■□□□□ 0.12
PRKN-210ENST00000612540 BBOX1O75936 387 aa15.78■□□□□ 0.12
PRKN-210ENST00000612540 RGS3P49796 1198 aa15.78■□□□□ 0.12
PRKN-210ENST00000612540 CHRNDQ07001 517 aa15.78■□□□□ 0.12
PRKN-210ENST00000612540 AACSQ86V21 672 aa15.78■□□□□ 0.12
PRKN-210ENST00000612540 SKAP1Q86WV1 359 aa15.78■□□□□ 0.12
PRKN-210ENST00000612540 TMX4Q9H1E5 349 aaPredicted RBP15.78■□□□□ 0.12
PRKN-210ENST00000612540 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
PRKN-210ENST00000612540 ZNF609O15014 1411 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.12
PRKN-210ENST00000612540 TOMM70O94826 608 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
PRKN-210ENST00000612540 TNNI3KQ59H18 835 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 PRPF40BQ6NWY9 871 aaKnown RBP15.77■□□□□ 0.12
PRKN-210ENST00000612540 TMC4Q7Z404 712 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 NMRK2Q9NPI5 230 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 MINPP1Q9UNW1 487 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 FPGT-TNNI3KV9GXZ4 949 aa15.77■□□□□ 0.12
PRKN-210ENST00000612540 TAF5LO75529 589 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 KCNJ4P48050 445 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 SLC51AQ86UW1 340 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 NEUROD6Q96NK8 337 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 ANKRD2Q9GZV1 360 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 AKAP2Q9Y2D5 859 aa15.76■□□□□ 0.11
PRKN-210ENST00000612540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.76■□□□□ 0.11
PRKN-210ENST00000612540 PDE8BO95263 885 aa15.75■□□□□ 0.11
PRKN-210ENST00000612540 PDE4AP27815 886 aa15.75■□□□□ 0.11
PRKN-210ENST00000612540 PUM3Q15397 648 aaKnown RBP15.75■□□□□ 0.11
PRKN-210ENST00000612540 C16orf71Q8IYS4 520 aaPredicted RBP15.75■□□□□ 0.11
PRKN-210ENST00000612540 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
PRKN-210ENST00000612540 OTUD7AQ8TE49 926 aaPredicted RBP15.75■□□□□ 0.11
PRKN-210ENST00000612540 CCDC8Q9H0W5 538 aaPredicted RBP15.75■□□□□ 0.11
PRKN-210ENST00000612540 ARAP2Q8WZ64 1704 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 XDHP47989 1333 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 A0A1B0GUL7 405 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 SLC5A1P13866 664 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 VGLL2Q8N8G2 317 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 EAF2Q96CJ1 260 aaPredicted RBP15.74■□□□□ 0.11
PRKN-210ENST00000612540 GPR108Q9NPR9 543 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 RNF181Q9P0P0 153 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 ATP6V0A2Q9Y487 856 aa15.74■□□□□ 0.11
PRKN-210ENST00000612540 IFIT1P09914 478 aaKnown RBP15.73■□□□□ 0.11
PRKN-210ENST00000612540 GPSM2P81274 684 aa15.73■□□□□ 0.11
PRKN-210ENST00000612540 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms