RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 RPS12P25398 132 aaKnown RBP22.87■■□□□ 1.25
SSBP1-215ENST00000612337 DOK7Q18PE1 504 aa22.87■■□□□ 1.25
SSBP1-215ENST00000612337 CYP4F22Q6NT55 531 aa22.87■■□□□ 1.25
SSBP1-215ENST00000612337 KSR2Q6VAB6 950 aa22.87■■□□□ 1.25
SSBP1-215ENST00000612337 CDC37L1Q7L3B6 337 aa22.87■■□□□ 1.25
SSBP1-215ENST00000612337 WWC1Q8IX03 1113 aa22.87■■□□□ 1.25
SSBP1-215ENST00000612337 JARID2Q92833 1246 aaPredicted RBP22.87■■□□□ 1.25
SSBP1-215ENST00000612337 GPR101Q96P66 508 aaPredicted RBP22.87■■□□□ 1.25
SSBP1-215ENST00000612337 ZC3H12CQ9C0D7 883 aaKnown RBP22.87■■□□□ 1.25
SSBP1-215ENST00000612337 PI4KAP2A4QPH2 592 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 PI4KAP1Q8N8J0 262 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 STK31Q9BXU1 1019 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 KCNQ5Q9NR82 932 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 ANKIB1Q9P2G1 1089 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 GGA1Q9UJY5 639 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 RTL9Q8NET4 1388 aa22.86■■□□□ 1.25
SSBP1-215ENST00000612337 UFL1O94874 794 aa22.85■■□□□ 1.25
SSBP1-215ENST00000612337 IGKV5-2P06315 115 aa22.85■■□□□ 1.25
SSBP1-215ENST00000612337 LBX1P52954 281 aa22.85■■□□□ 1.25
SSBP1-215ENST00000612337 NCBP3Q53F19 620 aaKnown RBP22.85■■□□□ 1.25
SSBP1-215ENST00000612337 SAMD7Q7Z3H4 446 aa22.85■■□□□ 1.25
SSBP1-215ENST00000612337 SAPCD2Q86UD0 394 aa22.85■■□□□ 1.25
SSBP1-215ENST00000612337 CCDC85AQ96PX6 553 aaPredicted RBP22.85■■□□□ 1.25
SSBP1-215ENST00000612337 IL16Q14005 1332 aa22.84■■□□□ 1.25
SSBP1-215ENST00000612337 HSPA8P11142 646 aaKnown RBP22.84■■□□□ 1.25
SSBP1-215ENST00000612337 TWISTNBQ3B726 338 aaPredicted RBP22.84■■□□□ 1.25
SSBP1-215ENST00000612337 SCN9AQ15858 1988 aa22.83■■□□□ 1.25
SSBP1-215ENST00000612337 NEXNQ0ZGT2 675 aa22.83■■□□□ 1.25
SSBP1-215ENST00000612337 GRM1Q13255 1194 aa22.83■■□□□ 1.25
SSBP1-215ENST00000612337 ANKRD18AQ8IVF6 992 aa22.83■■□□□ 1.25
SSBP1-215ENST00000612337 HHIPL1Q96JK4 782 aa22.83■■□□□ 1.25
SSBP1-215ENST00000612337 VIL1P09327 827 aaKnown RBP22.82■■□□□ 1.24
SSBP1-215ENST00000612337 CTSWP56202 376 aa22.82■■□□□ 1.24
SSBP1-215ENST00000612337 TBC1D10BQ4KMP7 808 aaPredicted RBP22.82■■□□□ 1.24
SSBP1-215ENST00000612337 XDHP47989 1333 aa22.82■■□□□ 1.24
SSBP1-215ENST00000612337 G3V3G9 751 aa22.81■■□□□ 1.24
SSBP1-215ENST00000612337 MAP2K2P36507 400 aa22.81■■□□□ 1.24
SSBP1-215ENST00000612337 DCAF8Q5TAQ9 597 aa22.81■■□□□ 1.24
SSBP1-215ENST00000612337 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
SSBP1-215ENST00000612337 CDC5LQ99459 802 aaKnown RBP22.81■■□□□ 1.24
SSBP1-215ENST00000612337 ZNF408Q9H9D4 720 aa22.81■■□□□ 1.24
SSBP1-215ENST00000612337 MYH3P11055 1940 aa22.8■■□□□ 1.24
SSBP1-215ENST00000612337 NEURL1BA8MQ27 555 aa22.8■■□□□ 1.24
SSBP1-215ENST00000612337 EGFRP00533 1210 aa22.8■■□□□ 1.24
SSBP1-215ENST00000612337 SLC4A2P04920 1241 aa22.8■■□□□ 1.24
SSBP1-215ENST00000612337 G2E3Q7L622 706 aa22.8■■□□□ 1.24
SSBP1-215ENST00000612337 BEGAINQ9BUH8 593 aa22.8■■□□□ 1.24
SSBP1-215ENST00000612337 AOC2O75106 756 aa22.79■■□□□ 1.24
SSBP1-215ENST00000612337 CWF19L2Q2TBE0 894 aaKnown RBP22.79■■□□□ 1.24
SSBP1-215ENST00000612337 KRT26Q7Z3Y9 468 aa22.79■■□□□ 1.24
SSBP1-215ENST00000612337 TTLL11Q8NHH1 800 aa22.79■■□□□ 1.24
SSBP1-215ENST00000612337 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
SSBP1-215ENST00000612337 ZNF609O15014 1411 aa22.79■■□□□ 1.24
SSBP1-215ENST00000612337 POLR2AP24928 1970 aaKnown RBP22.79■■□□□ 1.24
SSBP1-215ENST00000612337 ATP2B4P23634 1241 aa22.78■■□□□ 1.24
SSBP1-215ENST00000612337 RBM26Q5T8P6 1007 aaKnown RBP22.78■■□□□ 1.24
SSBP1-215ENST00000612337 PSME4Q14997 1843 aa22.78■■□□□ 1.24
SSBP1-215ENST00000612337 KIF4BQ2VIQ3 1234 aa22.77■■□□□ 1.24
SSBP1-215ENST00000612337 DCPSQ96C86 337 aaKnown RBP22.77■■□□□ 1.24
SSBP1-215ENST00000612337 GREM2Q9H772 168 aa22.77■■□□□ 1.24
SSBP1-215ENST00000612337 BSDC1Q9NW68 430 aaPredicted RBP22.77■■□□□ 1.24
SSBP1-215ENST00000612337 H7C1W4 665 aa22.76■■□□□ 1.23
SSBP1-215ENST00000612337 ZEB1P37275 1124 aaPredicted RBP22.76■■□□□ 1.23
SSBP1-215ENST00000612337 FLIIQ13045 1269 aa22.76■■□□□ 1.23
SSBP1-215ENST00000612337 RSBN1LQ6PCB5 846 aaPredicted RBP22.76■■□□□ 1.23
SSBP1-215ENST00000612337 DLK2Q6UY11 383 aa22.76■■□□□ 1.23
SSBP1-215ENST00000612337 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
SSBP1-215ENST00000612337 FANCIQ9NVI1 1328 aa22.76■■□□□ 1.23
SSBP1-215ENST00000612337 CACNA1FO60840 1977 aa22.76■■□□□ 1.23
SSBP1-215ENST00000612337 ANP32CO43423 234 aa22.75■■□□□ 1.23
SSBP1-215ENST00000612337 ZNF280AP59817 542 aaPredicted RBP22.75■■□□□ 1.23
SSBP1-215ENST00000612337 UBE3BQ7Z3V4 1068 aa22.75■■□□□ 1.23
SSBP1-215ENST00000612337 PODNQ7Z5L7 613 aa22.75■■□□□ 1.23
SSBP1-215ENST00000612337 MINPP1Q9UNW1 487 aa22.75■■□□□ 1.23
SSBP1-215ENST00000612337 SPEF2Q9C093 1822 aa22.74■■□□□ 1.23
SSBP1-215ENST00000612337 ADM5C9JUS6 153 aa22.74■■□□□ 1.23
SSBP1-215ENST00000612337 HUNKP57058 714 aa22.74■■□□□ 1.23
SSBP1-215ENST00000612337 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
SSBP1-215ENST00000612337 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
SSBP1-215ENST00000612337 MED23Q9ULK4 1368 aa22.74■■□□□ 1.23
SSBP1-215ENST00000612337 BRPF1P55201 1214 aaPredicted RBP22.73■■□□□ 1.23
SSBP1-215ENST00000612337 FKBP5Q13451 457 aaPredicted RBP22.73■■□□□ 1.23
SSBP1-215ENST00000612337 GCKRQ14397 625 aa22.73■■□□□ 1.23
SSBP1-215ENST00000612337 USP17L3A6NCW0 530 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 USP17L4A6NCW7 530 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 CA12O43570 354 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 USP17L1Q7RTZ2 530 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 SULF1Q8IWU6 871 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 DNAAF4Q8WXU2 420 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 GMLQ99445 158 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 MYH16Q9H6N6 1097 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 GBA2Q9HCG7 927 aaPredicted RBP22.72■■□□□ 1.23
SSBP1-215ENST00000612337 GGA3Q9NZ52 723 aa22.72■■□□□ 1.23
SSBP1-215ENST00000612337 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
SSBP1-215ENST00000612337 VAMP4O75379 141 aa22.71■■□□□ 1.23
SSBP1-215ENST00000612337 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
SSBP1-215ENST00000612337 CCT4P50991 539 aaKnown RBP22.71■■□□□ 1.23
SSBP1-215ENST00000612337 CASP7P55210 303 aa22.71■■□□□ 1.23
SSBP1-215ENST00000612337 NOGQ13253 232 aa22.71■■□□□ 1.23
SSBP1-215ENST00000612337 C2orf69Q8N8R5 385 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms