RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 TSC1Q92574 1164 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 SLIT3O75094 1523 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 RPAP1Q9BWH6 1393 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 AACSQ86V21 672 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 EDC3Q96F86 508 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 SGSM3Q96HU1 749 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 FAM227BQ96M60 508 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 ZKSCAN5Q9Y2L8 839 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 WDR33Q9C0J8 1336 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 STK3Q13188 491 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 IL17RAQ96F46 866 aa12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 MYCBPQ99417 103 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 TLR7Q9NYK1 1049 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-202ENST00000611950 UQCRHLA0A096LP55 91 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 STX6O43752 255 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 CHGBP05060 677 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 UQCRHP07919 91 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 MYL6BP14649 208 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 GJB2P29033 226 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 CBX1P83916 185 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 ZNF513Q8N8E2 541 aaPredicted RBP12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 TAF6LQ9Y6J9 622 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 IFIT2P09913 472 aaKnown RBP12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 NBPF5PQ86XG9 351 aaPredicted RBP12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 CLASRPQ8N2M8 674 aaKnown RBP12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 INTS4Q96HW7 963 aaKnown RBP12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 TSPYL1Q9H0U9 437 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
PCDHGC3-202ENST00000611950 ZSCAN22P10073 491 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 YY1P25490 414 aa12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 FOSBP53539 338 aa12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 CAMK4Q16566 473 aa12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 SYAP1Q96A49 352 aaPredicted RBP12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 LIMCH1Q9UPQ0 1083 aa12.66□□□□□ -0.38
PCDHGC3-202ENST00000611950 MTX1Q13505 466 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 SPC24Q8NBT2 197 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 TTC14Q96N46 770 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 KDM4AO75164 1064 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
PCDHGC3-202ENST00000611950 CAMTA1Q9Y6Y1 1673 aa12.65□□□□□ -0.39
PCDHGC3-202ENST00000611950 NUP188Q5SRE5 1749 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 CCDC39Q9UFE4 941 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 RREB1Q92766 1687 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 ADCY5O95622 1261 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 F13A1P00488 732 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 SSR1P43307 286 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 DNAJC14Q6Y2X3 702 aaPredicted RBP12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 BICC1Q9H694 974 aaKnown RBP12.64□□□□□ -0.39
PCDHGC3-202ENST00000611950 SIPA1L3O60292 1781 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 ME3Q16798 604 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 KAZALD1Q96I82 304 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 ALDH1L1O75891 902 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 HSP90AB4PQ58FF6 505 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 RINLQ6ZS11 566 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 ERBB3P21860 1342 aa12.63□□□□□ -0.39
PCDHGC3-202ENST00000611950 EPB41L2O43491 1005 aaKnown RBP12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 ST3GAL1Q11201 340 aa12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 PDIA6Q15084 440 aa12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 A0A0D9SFI3 127 aa12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 FSD1Q9BTV5 496 aa12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
PCDHGC3-202ENST00000611950 CCDC183Q5T5S1 534 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 TSHZ1Q6ZSZ6 1077 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms