RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	PYGL	P06737	847 aa		19.84	■□□□□ 0.77
CDK11B-205	ENST00000611150	CEBPA	P49715	358 aa	Predicted RBP	19.84	■□□□□ 0.77
CDK11B-205	ENST00000611150	NAA25	Q14CX7	972 aa		19.84	■□□□□ 0.77
CDK11B-205	ENST00000611150	MAP3K11	Q16584	847 aa		19.84	■□□□□ 0.77
CDK11B-205	ENST00000611150	PSD	A5PKW4	1024 aa	Predicted RBP	19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	PEX19	P40855	299 aa		19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	GNL2	Q13823	731 aa	Known RBP	19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	MYLK4	Q86YV6	388 aa	Predicted RBP	19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	PROCA1	Q8NCQ7	364 aa	Predicted RBP	19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	DNAI1	Q9UI46	699 aa		19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	CAPN7	Q9Y6W3	813 aa		19.83	■□□□□ 0.77
CDK11B-205	ENST00000611150	TCOF1	Q13428	1488 aa	Known RBP	19.83	■□□□□ 0.76
CDK11B-205	ENST00000611150	HDGFL1	Q5TGJ6	251 aa		19.83	■□□□□ 0.76
CDK11B-205	ENST00000611150	INTS3	Q68E01	1043 aa	Known RBP	19.83	■□□□□ 0.76
CDK11B-205	ENST00000611150	PPP1R13B	Q96KQ4	1090 aa		19.83	■□□□□ 0.76
CDK11B-205	ENST00000611150	CARD6	Q9BX69	1037 aa		19.83	■□□□□ 0.76
CDK11B-205	ENST00000611150	PARD6B	Q9BYG5	372 aa		19.83	■□□□□ 0.76
CDK11B-205	ENST00000611150	GCC1	Q96CN9	775 aa		19.82	■□□□□ 0.76
CDK11B-205	ENST00000611150	SPDL1	Q96EA4	605 aa		19.82	■□□□□ 0.76
CDK11B-205	ENST00000611150	IRX2	Q9BZI1	471 aa	Predicted RBP	19.82	■□□□□ 0.76
CDK11B-205	ENST00000611150	PHF8	Q9UPP1	1060 aa		19.82	■□□□□ 0.76
CDK11B-205	ENST00000611150	RTN3	O95197	1032 aa	Predicted RBP	19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	TSPY4	P0CV99	314 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	TSPY10	P0CW01	314 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	DHX8	Q14562	1220 aa	Known RBP	19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	MCM6	Q14566	821 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	ARID5B	Q14865	1188 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	CDCA2	Q69YH5	1023 aa	Predicted RBP	19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	SPDYE1	Q8NFV5	336 aa	Predicted RBP	19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	SRCIN1	Q9C0H9	1055 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	RANBP17	Q9H2T7	1088 aa	Known RBP	19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	FRMD3	A2A2Y4	597 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	OAT	P04181	439 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	ISM2	Q6H9L7	571 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	RABGGTA	Q92696	567 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	PLEKHG4B	Q96PX9	1271 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	ATP6V1D	Q9Y5K8	247 aa		19.81	■□□□□ 0.76
CDK11B-205	ENST00000611150	TPD52L2	O43399	206 aa	Known RBP	19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	SKAP2	O75563	359 aa	Predicted RBP	19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	EZR	P15311	586 aa	Known RBP	19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	ETF1	P62495	437 aa	Known RBP	19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	ANO6	Q4KMQ2	910 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	FILIP1L	Q4L180	1135 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	HOMER1	Q86YM7	354 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	C3	P01024	1663 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	GSDMD	P57764	484 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	BATF3	Q9NR55	127 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	ZBTB40	Q9NUA8	1239 aa		19.8	■□□□□ 0.76
CDK11B-205	ENST00000611150	URI1	O94763	535 aa	Predicted RBP	19.79	■□□□□ 0.76
CDK11B-205	ENST00000611150	ATP2B2	Q01814	1243 aa		19.79	■□□□□ 0.76
CDK11B-205	ENST00000611150	HNRNPLL	Q8WVV9	542 aa	Known RBP	19.79	■□□□□ 0.76
CDK11B-205	ENST00000611150	NEK4	P51957	841 aa		19.79	■□□□□ 0.76
CDK11B-205	ENST00000611150	SPATA21	Q7Z572	469 aa		19.79	■□□□□ 0.76
CDK11B-205	ENST00000611150	EPB41L2	O43491	1005 aa	Known RBP	19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	MYSM1	Q5VVJ2	828 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	SARM1	Q6SZW1	724 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	EZH1	Q92800	747 aa	Predicted RBP	19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	XAGE2	Q96GT9	111 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	GOLGA6C	A6NDK9	693 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	GOLGA6B	A6NDN3	693 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	GOLGA6D	P0CG33	693 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	LAMB3	Q13751	1172 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	SKIDA1	Q1XH10	827 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	EPC1	Q9H2F5	836 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	FAM204A	Q9H8W3	233 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	GOLGA6A	Q9NYA3	693 aa		19.78	■□□□□ 0.76
CDK11B-205	ENST00000611150	PREX1	Q8TCU6	1659 aa		19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	CEP85L	Q5SZL2	805 aa		19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	E4F1	Q66K89	784 aa	Predicted RBP	19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	GGT6	Q6P531	493 aa		19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	NUB1	Q9Y5A7	615 aa		19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	SETD1B	Q9UPS6	1966 aa	Known RBP	19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	MROH2A	A6NES4	1674 aa		19.77	■□□□□ 0.76
CDK11B-205	ENST00000611150	ZSCAN9	O15535	394 aa	Predicted RBP	19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	FIBP	O43427	364 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	FSBP	O95073	299 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	CAVIN2	O95810	425 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	KCNJ6	P48051	423 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	CCT5	P48643	541 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	VPS53	Q5VIR6	699 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	MAB21L3	Q8N8X9	362 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	NUP62CL	Q9H1M0	184 aa		19.77	■□□□□ 0.75
CDK11B-205	ENST00000611150	ENO4	A6NNW6	628 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	PYGB	P11216	843 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	MFSD4B	Q5TF39	518 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	CLIC6	Q96NY7	704 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	LZTS2	Q9BRK4	669 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	G3BP2	Q9UN86	482 aa	Known RBP	19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	MAST1	Q9Y2H9	1570 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	ATXN2	Q99700	1313 aa	Known RBP	19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	MYO1F	O00160	1098 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	N4BP1	O75113	896 aa	Known RBP	19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	FNTA	P49354	379 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	AFAP1L1	Q8TED9	768 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	CCDC102A	Q96A19	550 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	ATP6V0A4	Q9HBG4	840 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	KLC4	Q9NSK0	619 aa		19.76	■□□□□ 0.75
CDK11B-205	ENST00000611150	ERLIN1	O75477	346 aa		19.75	■□□□□ 0.75
CDK11B-205	ENST00000611150	CHGA	P10645	457 aa	Known RBP	19.75	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms