RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 GRAPLQ8TC17 118 aaPredicted RBP10.78□□□□□ -0.68
FAM228B-206ENST00000611138 CELF1Q92879 486 aaKnown RBP10.78□□□□□ -0.68
FAM228B-206ENST00000611138 CNKSR1Q969H4 720 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 CHMP4BQ9H444 224 aaKnown RBP10.78□□□□□ -0.68
FAM228B-206ENST00000611138 ZBTB40Q9NUA8 1239 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 BCS1LQ9Y276 419 aa10.78□□□□□ -0.68
FAM228B-206ENST00000611138 ANKRD18BA2A2Z9 1011 aa10.77□□□□□ -0.69
FAM228B-206ENST00000611138 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
FAM228B-206ENST00000611138 ALDH1B1P30837 517 aa10.77□□□□□ -0.69
FAM228B-206ENST00000611138 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.69
FAM228B-206ENST00000611138 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.69
FAM228B-206ENST00000611138 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
FAM228B-206ENST00000611138 TAF7LQ5H9L4 462 aa10.77□□□□□ -0.69
FAM228B-206ENST00000611138 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
FAM228B-206ENST00000611138 CRAMP1Q96RY5 1269 aa10.77□□□□□ -0.69
FAM228B-206ENST00000611138 GOLGB1Q14789 3259 aaKnown RBP10.77□□□□□ -0.69
FAM228B-206ENST00000611138 SRGAP3O43295 1099 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 KCNA4P22459 653 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 CEP85Q6P2H3 762 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 OLFM4Q6UX06 510 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 ANKRD18AQ8IVF6 992 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 KLHDC4Q8TBB5 520 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 CDC5LQ99459 802 aaKnown RBP10.76□□□□□ -0.69
FAM228B-206ENST00000611138 SBF1O95248 1867 aa10.76□□□□□ -0.69
FAM228B-206ENST00000611138 TIAM2Q8IVF5 1701 aa10.75□□□□□ -0.69
FAM228B-206ENST00000611138 DUOX1Q9NRD9 1551 aa10.75□□□□□ -0.69
FAM228B-206ENST00000611138 PNMA6EA0A0J9YXQ4 647 aa10.75□□□□□ -0.69
FAM228B-206ENST00000611138 C21orf2O43822 256 aa10.75□□□□□ -0.69
FAM228B-206ENST00000611138 IGHMBP2P38935 993 aaKnown RBP10.75□□□□□ -0.69
FAM228B-206ENST00000611138 RPS8P62241 208 aaKnown RBP10.75□□□□□ -0.69
FAM228B-206ENST00000611138 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 DICER1Q9UPY3 1922 aaKnown RBP10.74□□□□□ -0.69
FAM228B-206ENST00000611138 NEFLP07196 543 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 YBX3P16989 372 aaKnown RBP eCLIP10.74□□□□□ -0.69
FAM228B-206ENST00000611138 RFX5P48382 616 aaPredicted RBP10.74□□□□□ -0.69
FAM228B-206ENST00000611138 MTX1Q13505 466 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 GPR162Q16538 588 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 MPHOSPH8Q99549 860 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 SIL1Q9H173 461 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 CNNM1Q9NRU3 951 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 PA2G4Q9UQ80 394 aaKnown RBP10.74□□□□□ -0.69
FAM228B-206ENST00000611138 ARAP2Q8WZ64 1704 aa10.74□□□□□ -0.69
FAM228B-206ENST00000611138 BBOX1O75936 387 aa10.73□□□□□ -0.69
FAM228B-206ENST00000611138 ATP8B2P98198 1209 aa10.73□□□□□ -0.69
FAM228B-206ENST00000611138 PUS3Q9BZE2 481 aaKnown RBP10.73□□□□□ -0.69
FAM228B-206ENST00000611138 ATP6V0A2Q9Y487 856 aa10.73□□□□□ -0.69
FAM228B-206ENST00000611138 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 PTPN12Q05209 780 aaKnown RBP10.72□□□□□ -0.69
FAM228B-206ENST00000611138 LRRC24Q50LG9 513 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 CCDC93Q567U6 631 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 TMC4Q7Z404 712 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 RPAP2Q8IXW5 612 aaPredicted RBP10.72□□□□□ -0.69
FAM228B-206ENST00000611138 SP8Q8IXZ3 490 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 FAM163AQ96GL9 167 aaPredicted RBP10.72□□□□□ -0.69
FAM228B-206ENST00000611138 TMX4Q9H1E5 349 aaPredicted RBP10.72□□□□□ -0.69
FAM228B-206ENST00000611138 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 SNED1Q8TER0 1413 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 CHD4Q14839 1912 aa10.72□□□□□ -0.69
FAM228B-206ENST00000611138 HMMRO75330 724 aa10.71□□□□□ -0.69
FAM228B-206ENST00000611138 GPSM2P81274 684 aa10.71□□□□□ -0.69
FAM228B-206ENST00000611138 SOGA3Q5TF21 947 aa10.71□□□□□ -0.69
FAM228B-206ENST00000611138 C7orf43Q8WVR3 580 aa10.71□□□□□ -0.69
FAM228B-206ENST00000611138 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
FAM228B-206ENST00000611138 BSDC1Q9NW68 430 aaPredicted RBP10.71□□□□□ -0.69
FAM228B-206ENST00000611138 MINPP1Q9UNW1 487 aa10.71□□□□□ -0.69
FAM228B-206ENST00000611138 NSFL1CQ9UNZ2 370 aaKnown RBP10.71□□□□□ -0.69
FAM228B-206ENST00000611138 EYA2O00167 538 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 TAF5LO75529 589 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 SURF6O75683 361 aaKnown RBP10.7□□□□□ -0.7
FAM228B-206ENST00000611138 RASSF7Q02833 373 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 CHRNDQ07001 517 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
FAM228B-206ENST00000611138 METTL24Q5JXM2 366 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 DPP8Q6V1X1 898 aaPredicted RBP10.7□□□□□ -0.7
FAM228B-206ENST00000611138 ARHGAP27Q6ZUM4 889 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 MPNDQ8N594 471 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 HELBQ8NG08 1087 aaPredicted RBP10.7□□□□□ -0.7
FAM228B-206ENST00000611138 ANKIB1Q9P2G1 1089 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 EXOC6BQ9Y2D4 811 aa10.7□□□□□ -0.7
FAM228B-206ENST00000611138 XDHP47989 1333 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 MROH5Q6ZUA9 1318 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 APBB1O00213 710 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 NFKBIEO00221 500 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 G3BP1Q13283 466 aaKnown RBP eCLIP10.69□□□□□ -0.7
FAM228B-206ENST00000611138 AAMPQ13685 434 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
FAM228B-206ENST00000611138 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 ATG9AQ7Z3C6 839 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 GPR101Q96P66 508 aaPredicted RBP10.69□□□□□ -0.7
FAM228B-206ENST00000611138 ANKRD2Q9GZV1 360 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 RIPOR2Q9Y4F9 1068 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 PSME4Q14997 1843 aa10.69□□□□□ -0.7
FAM228B-206ENST00000611138 WTIPA6NIX2 430 aaPredicted RBP10.68□□□□□ -0.7
FAM228B-206ENST00000611138 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 CIAO1O76071 339 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 UFL1O94874 794 aa10.68□□□□□ -0.7
FAM228B-206ENST00000611138 IL15P40933 162 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms