RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 ZNF213O14771 459 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 FGFR1OPO95684 399 aaKnown RBP10.43□□□□□ -0.74
COL25A1-208ENST00000610288 CEP57Q86XR8 500 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 IFNKQ9P0W0 207 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 DENND4BO75064 1496 aaPredicted RBP10.43□□□□□ -0.74
COL25A1-208ENST00000610288 ISM2Q6H9L7 571 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 OTUD6BQ8N6M0 293 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 RTL1A6NKG5 1358 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 N4BP3O15049 544 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 ELF2Q15723 593 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 CACNA2D4Q7Z3S7 1137 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 SWAP70Q9UH65 585 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 TTC41PQ6P2S7 1318 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 MKRN1Q9UHC7 482 aaKnown RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 URB2Q14146 1524 aaKnown RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 IARSP41252 1262 aaKnown RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 SSRP1Q08945 709 aaKnown RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 HLTFQ14527 1009 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 MKNK2Q9HBH9 465 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 ANXA1P04083 346 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 CLNS1AP54105 237 aaKnown RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 SMC1AQ14683 1233 aaKnown RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 SPECC1Q5M775 1068 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 SPECC1LQ69YQ0 1117 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 UBE3BQ7Z3V4 1068 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
COL25A1-208ENST00000610288 ZNF287Q9HBT7 754 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 JADE2Q9NQC1 790 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 ANKRD18BA2A2Z9 1011 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 ATP5J2-PTCD1G3V325 749 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 ZNF76P36508 570 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 CLSTN2Q9H4D0 955 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 IMPACTQ9P2X3 320 aa10.42□□□□□ -0.74
COL25A1-208ENST00000610288 NEBLO76041 1014 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 GPTP24298 496 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 CYLC1P35663 651 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 TUBB2AQ13885 445 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 ANKRD24Q8TF21 1146 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 TUBB2BQ9BVA1 445 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 CBX8Q9HC52 389 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 PZPP20742 1482 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 SPTLC2O15270 562 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 RANBP6O60518 1105 aaKnown RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 SLC5A1P13866 664 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 IQCA1Q86XH1 822 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 CCDC50Q8IVM0 306 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 IFNL2Q8IZJ0 200 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 TCEANC2Q96MN5 208 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 SLC12A7Q9Y666 1083 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 GCOM1H8Y6P7 765 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 CCDC172P0C7W6 258 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 MYZAPP0CAP1 466 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 RBBP5Q15291 538 aaKnown RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 DNAJC21Q5F1R6 531 aaKnown RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 VPS36Q86VN1 386 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 CNPY4Q8N129 248 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 IFIT3O14879 490 aaKnown RBP10.41□□□□□ -0.74
COL25A1-208ENST00000610288 ZPR1O75312 459 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 ZSCAN26Q16670 478 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 KRT28Q7Z3Y7 464 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 MAATS1Q7Z4T9 603 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 TSC1Q92574 1164 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
COL25A1-208ENST00000610288 RAD50Q92878 1312 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 FAM160A1Q05DH4 1040 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 ITSN2Q9NZM3 1697 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 TSPYL6Q8N831 410 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 RNF41Q9H4P4 317 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-208ENST00000610288 SEC63Q9UGP8 760 aaKnown RBP10.4□□□□□ -0.74
COL25A1-208ENST00000610288 GADD45BO75293 160 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-208ENST00000610288 LDHAL6AQ6ZMR3 332 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 DZIP1Q86YF9 867 aaKnown RBP10.4□□□□□ -0.74
COL25A1-208ENST00000610288 FAM114A1Q8IWE2 563 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 PSMD1Q99460 953 aa10.4□□□□□ -0.74
COL25A1-208ENST00000610288 SEPT11Q9NVA2 429 aaKnown RBP10.4□□□□□ -0.74
COL25A1-208ENST00000610288 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-208ENST00000610288 MTIF2P46199 727 aaKnown RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 TDRD12Q587J7 1177 aaKnown RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 CREB3L3Q68CJ9 461 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 NCOA7Q8NI08 942 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 MYL5Q02045 173 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 Q6ZUG5 572 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 ARFGAP2Q8N6H7 521 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 TSG101Q99816 390 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 UTP14AQ9BVJ6 771 aaKnown RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 SPATS2LQ9NUQ6 558 aaKnown RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 CWC25Q9NXE8 425 aaPredicted RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 BMP15O95972 392 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 ZNF853P0CG23 659 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 KIF5BP33176 963 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
COL25A1-208ENST00000610288 RNF168Q8IYW5 571 aaPredicted RBP10.39□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC113Q9H0I3 377 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms