RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	MVP	Q14764	893 aa	Known RBP	11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	GRIPAP1	Q4V328	841 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	SOGA3	Q5TF21	947 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	C2CD5	Q86YS7	1000 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	ITPRIP	Q8IWB1	547 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	CNKSR1	Q969H4	720 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	CLUAP1	Q96AJ1	413 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	RBM17	Q96I25	401 aa	Known RBP	11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	HS3ST6	Q96QI5	342 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	SYT17	Q9BSW7	474 aa		11.25	□□□□□ -0.61
LINC00635-222	ENST00000609429	CASP7	P55210	303 aa		11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	DDX46	Q7L014	1031 aa	Known RBP	11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	TMEM57	Q8N5G2	664 aa		11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	CRAMP1	Q96RY5	1269 aa		11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	CDC5L	Q99459	802 aa	Known RBP	11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	TMX4	Q9H1E5	349 aa	Predicted RBP	11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	PIM2	Q9P1W9	311 aa		11.24	□□□□□ -0.61
LINC00635-222	ENST00000609429	GNAI2	P04899	355 aa		11.23	□□□□□ -0.61
LINC00635-222	ENST00000609429	HCLS1	P14317	486 aa	Predicted RBP	11.23	□□□□□ -0.61
LINC00635-222	ENST00000609429	CC2D2B	Q6DHV5	1058 aa		11.23	□□□□□ -0.61
LINC00635-222	ENST00000609429	USP44	Q9H0E7	712 aa		11.23	□□□□□ -0.61
LINC00635-222	ENST00000609429	LRRC37A	A6NMS7	1700 aa		11.22	□□□□□ -0.61
LINC00635-222	ENST00000609429	CSF1R	P07333	972 aa		11.22	□□□□□ -0.61
LINC00635-222	ENST00000609429	RABL6	Q3YEC7	729 aa	Predicted RBP	11.22	□□□□□ -0.61
LINC00635-222	ENST00000609429	DALRD3	Q5D0E6	543 aa	Known RBP	11.22	□□□□□ -0.61
LINC00635-222	ENST00000609429	C3orf67	Q6ZVT6	689 aa		11.22	□□□□□ -0.61
LINC00635-222	ENST00000609429	TTLL6	Q8N841	843 aa		11.22	□□□□□ -0.61
LINC00635-222	ENST00000609429	FAM205C	A6NFA0	338 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	BBOX1	O75936	387 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	DPEP1	P16444	411 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	GRAP	Q13588	217 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	CCDC57	Q2TAC2	916 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	RTL5	Q5HYW3	569 aa	Predicted RBP	11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	TTLL11	Q8NHH1	800 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	GRAPL	Q8TC17	118 aa	Predicted RBP	11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	PANK1	Q8TE04	598 aa		11.21	□□□□□ -0.61
LINC00635-222	ENST00000609429	CACNA1S	Q13698	1873 aa		11.21	□□□□□ -0.62
LINC00635-222	ENST00000609429	ANKRD18B	A2A2Z9	1011 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	RLBP1	P12271	317 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	IFIT5	Q13325	482 aa	Known RBP	11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	MTX1	Q13505	466 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	NLGN2	Q8NFZ4	835 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	SUCLG2	Q96I99	432 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	MEIS3	Q99687	375 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429	FBXO3	Q9UK99	471 aa		11.2	□□□□□ -0.62
LINC00635-222	ENST00000609429		A0A0G2JLW4	131 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	PPEF1	O14829	653 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	ZBTB7B	O15156	539 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	PLIN1	O60240	522 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	GRIN3B	O60391	1043 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	CHRNA5	P30532	468 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	IGHMBP2	P38935	993 aa	Known RBP	11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	FOXO4	P98177	505 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	PRPF40B	Q6NWY9	871 aa	Known RBP	11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	LMBR1L	Q6UX01	489 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	ANKRD18A	Q8IVF6	992 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	SYNE4	Q8N205	404 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	CCDC24	Q8N4L8	307 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	BICC1	Q9H694	974 aa	Known RBP	11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	COG6	Q9Y2V7	657 aa		11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	LRRFIP2	Q9Y608	721 aa	Known RBP	11.19	□□□□□ -0.62
LINC00635-222	ENST00000609429	HMMR	O75330	724 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	KCNA3	P22001	575 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	ITGA6	P23229	1130 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	CCDC93	Q567U6	631 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	TAF7L	Q5H9L4	462 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	TNN	Q9UQP3	1299 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	CHMP3	Q9Y3E7	222 aa		11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.18	□□□□□ -0.62
LINC00635-222	ENST00000609429	RPS8	P62241	208 aa	Known RBP	11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	FAM161A	Q3B820	660 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	RTKN2	Q8IZC4	609 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	ANKRD44	Q8N8A2	993 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	MPHOSPH8	Q99549	860 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	GREM2	Q9H772	168 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	ZBTB40	Q9NUA8	1239 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	BSDC1	Q9NW68	430 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	BCS1L	Q9Y276	419 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	ATP6V0A2	Q9Y487	856 aa		11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	GOLGB1	Q14789	3259 aa	Known RBP	11.17	□□□□□ -0.62
LINC00635-222	ENST00000609429	SLX4	Q8IY92	1834 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	SPEF2	Q9C093	1822 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	LTBP3	Q9NS15	1303 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	NEFL	P07196	543 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	SP8	Q8IXZ3	490 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	SUPT20H	Q8NEM7	779 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	JARID2	Q92833	1246 aa	Predicted RBP	11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	KAZALD1	Q96I82	304 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	ANKRD2	Q9GZV1	360 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	VPS33B	Q9H267	617 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	FER1L6	Q2WGJ9	1857 aa		11.16	□□□□□ -0.62
LINC00635-222	ENST00000609429	SRGAP3	O43295	1099 aa		11.15	□□□□□ -0.62
LINC00635-222	ENST00000609429	GPR162	Q16538	588 aa		11.15	□□□□□ -0.62
LINC00635-222	ENST00000609429	HSP90AB4P	Q58FF6	505 aa		11.15	□□□□□ -0.62
LINC00635-222	ENST00000609429	EPHA10	Q5JZY3	1008 aa		11.15	□□□□□ -0.62
LINC00635-222	ENST00000609429	C20orf194	Q5TEA3	1177 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms