RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
LINC00343-212ENST00000608624 DZIP1LQ8IYY4 767 aaKnown RBP11.42□□□□□ -0.58
LINC00343-212ENST00000608624 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
LINC00343-212ENST00000608624 ZNF622Q969S3 477 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC00343-212ENST00000608624 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
LINC00343-212ENST00000608624 UTYO14607 1347 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 PDE6BP35913 854 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 CCT4P50991 539 aaKnown RBP11.41□□□□□ -0.58
LINC00343-212ENST00000608624 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
LINC00343-212ENST00000608624 CTSWP56202 376 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 TGFB2P61812 414 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 GREM2Q9H772 168 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
LINC00343-212ENST00000608624 H0YIN7 160 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 IPO8O15397 1037 aaKnown RBP11.4□□□□□ -0.58
LINC00343-212ENST00000608624 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
LINC00343-212ENST00000608624 ITPRIPQ8IWB1 547 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
LINC00343-212ENST00000608624 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
LINC00343-212ENST00000608624 BICC1Q9H694 974 aaKnown RBP11.4□□□□□ -0.58
LINC00343-212ENST00000608624 C9orf78Q9NZ63 289 aaPredicted RBP11.4□□□□□ -0.58
LINC00343-212ENST00000608624 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 BCS1LQ9Y276 419 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 COG6Q9Y2V7 657 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 LRRC37AA6NMS7 1700 aa11.4□□□□□ -0.58
LINC00343-212ENST00000608624 NPR1P16066 1061 aa11.39□□□□□ -0.59
LINC00343-212ENST00000608624 HOXA10P31260 410 aaPredicted RBP11.39□□□□□ -0.59
LINC00343-212ENST00000608624 STYK1Q6J9G0 422 aa11.39□□□□□ -0.59
LINC00343-212ENST00000608624 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
LINC00343-212ENST00000608624 RPGRQ92834 1020 aaKnown RBP11.39□□□□□ -0.59
LINC00343-212ENST00000608624 MASTLQ96GX5 879 aa11.39□□□□□ -0.59
LINC00343-212ENST00000608624 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
LINC00343-212ENST00000608624 LRRFIP2Q9Y608 721 aaKnown RBP11.39□□□□□ -0.59
LINC00343-212ENST00000608624 DUOX1Q9NRD9 1551 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 PDE8AO60658 829 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 PRELPP51888 382 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 SF3B3Q15393 1217 aaKnown RBP11.38□□□□□ -0.59
LINC00343-212ENST00000608624 LMBR1LQ6UX01 489 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
LINC00343-212ENST00000608624 A0A1B0GUL6 1792 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
LINC00343-212ENST00000608624 WTIPA6NIX2 430 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-212ENST00000608624 C21orf2O43822 256 aa11.37□□□□□ -0.59
LINC00343-212ENST00000608624 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-212ENST00000608624 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-212ENST00000608624 RASSF7Q02833 373 aa11.37□□□□□ -0.59
LINC00343-212ENST00000608624 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
LINC00343-212ENST00000608624 TTLL6Q8N841 843 aa11.37□□□□□ -0.59
LINC00343-212ENST00000608624 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
LINC00343-212ENST00000608624 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
LINC00343-212ENST00000608624 SUPT16HQ9Y5B9 1047 aaKnown RBP11.37□□□□□ -0.59
LINC00343-212ENST00000608624 COL4A5P29400 1685 aa11.36□□□□□ -0.59
LINC00343-212ENST00000608624 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
LINC00343-212ENST00000608624 CSF1RP07333 972 aa11.36□□□□□ -0.59
LINC00343-212ENST00000608624 PYGBP11216 843 aa11.36□□□□□ -0.59
LINC00343-212ENST00000608624 GRAPQ13588 217 aa11.36□□□□□ -0.59
LINC00343-212ENST00000608624 MVPQ14764 893 aaKnown RBP11.36□□□□□ -0.59
LINC00343-212ENST00000608624 GRAPLQ8TC17 118 aaPredicted RBP11.36□□□□□ -0.59
LINC00343-212ENST00000608624 RBM17Q96I25 401 aaKnown RBP11.36□□□□□ -0.59
LINC00343-212ENST00000608624 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
LINC00343-212ENST00000608624 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
LINC00343-212ENST00000608624 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
LINC00343-212ENST00000608624 NFKBIEO00221 500 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 ZBTB7BO15156 539 aaPredicted RBP11.35□□□□□ -0.59
LINC00343-212ENST00000608624 ITGA6P23229 1130 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 GPR162Q16538 588 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 RABL6Q3YEC7 729 aaPredicted RBP11.35□□□□□ -0.59
LINC00343-212ENST00000608624 CCDC152Q4G0S7 254 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 RNF166Q96A37 237 aaPredicted RBP11.35□□□□□ -0.59
LINC00343-212ENST00000608624 GPR101Q96P66 508 aaPredicted RBP11.35□□□□□ -0.59
LINC00343-212ENST00000608624 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 RTL9Q8NET4 1388 aa11.35□□□□□ -0.59
LINC00343-212ENST00000608624 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
LINC00343-212ENST00000608624 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
LINC00343-212ENST00000608624 DDX46Q7L014 1031 aaKnown RBP11.34□□□□□ -0.59
LINC00343-212ENST00000608624 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
LINC00343-212ENST00000608624 PUS3Q9BZE2 481 aaKnown RBP11.34□□□□□ -0.59
LINC00343-212ENST00000608624 SNAP23O00161 211 aa11.33□□□□□ -0.6
LINC00343-212ENST00000608624 HOXB3P14651 431 aaPredicted RBP11.33□□□□□ -0.6
LINC00343-212ENST00000608624 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
LINC00343-212ENST00000608624 PA2G4Q9UQ80 394 aaKnown RBP11.33□□□□□ -0.6
LINC00343-212ENST00000608624 SBF1O95248 1867 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 GNAI3P08754 354 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 KLRK1P26718 216 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
LINC00343-212ENST00000608624 GPSM2P81274 684 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 PDZRN3Q9UPQ7 1066 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.32□□□□□ -0.6
LINC00343-212ENST00000608624 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
LINC00343-212ENST00000608624 GNAI2P04899 355 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
LINC00343-212ENST00000608624 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms