RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 ADARB2Q9NS39 739 aaKnown RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 USP40Q9NVE5 1235 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 ANKARQ7Z5J8 1434 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 TECPR2O15040 1411 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 TSPY2A6NKD2 308 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 EVI5O60447 810 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 UQCRFS1P1P0C7P4 283 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 LIG1P18858 919 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 SOX10P56693 466 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 SP4Q02446 784 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 PDE4BQ07343 736 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 SAFBQ15424 915 aaKnown RBP eCLIP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 WDR66Q8TBY9 1149 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 GCC1Q96CN9 775 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 LGR6Q9HBX8 967 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 VAT1LQ9HCJ6 419 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 GGA3Q9NZ52 723 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 ZHX1Q9UKY1 873 aaPredicted RBP4.38□□□□□ -1.71
LINC01278-202ENST00000608623 COG6Q9Y2V7 657 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 STK24Q9Y6E0 443 aa4.38□□□□□ -1.71
LINC01278-202ENST00000608623 TRIM75PA6NK02 468 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 SSTR3P32745 418 aaPredicted RBP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 GMPSP49915 693 aaPredicted RBP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 NFIXQ14938 502 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 CAPNS2Q96L46 248 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 MBIPQ9NS73 344 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 MAP3K5Q99683 1374 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 PRAMEF22A3QJZ6 481 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 NOP56O00567 594 aaKnown RBP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 CA12O43570 354 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 FAM161AQ3B820 660 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 SASH1O94885 1247 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 ATXN8OSP0DMR3 200 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 TRAF1Q13077 416 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 SF3A1Q15459 793 aaKnown RBP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 TNPO1Q92973 898 aaKnown RBP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 CDK5RAP3Q96JB5 506 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 ELP3Q9H9T3 547 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 TLR3O15455 904 aaKnown RBP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 ITGA6P23229 1130 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 LBX1P52954 281 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 NSMFQ6X4W1 530 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 ARID3AQ99856 593 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 RNF208Q9H0X6 261 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.37□□□□□ -1.71
LINC01278-202ENST00000608623 POLKQ9UBT6 870 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 XDHP47989 1333 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 CARMIL3Q8ND23 1372 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 SSH2Q76I76 1423 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 RALGAPBQ86X10 1494 aa4.37□□□□□ -1.71
LINC01278-202ENST00000608623 CCDC69A6NI79 296 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 FKTNO75072 461 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 TAF5LO75529 589 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 TSPY3P0CV98 308 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 TSPY8P0CW00 308 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 KCNJ6P48051 423 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ANGEL2Q5VTE6 544 aaKnown RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 LRSAM1Q6UWE0 723 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 WRNIP1Q96S55 665 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ZHX3Q9H4I2 956 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ANO2Q9NQ90 1003 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 HOMER2Q9NSB8 354 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 SAP30BPQ9UHR5 308 aaKnown RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 DENND2AQ9ULE3 1009 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 RAD50Q92878 1312 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 CCL15-CCL14A0A0B4J2E2 113 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ECE2O60344 883 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ATP2B1P20020 1258 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 TMPOP42166 694 aaKnown RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 FCGRTP55899 365 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 CCL15Q16663 113 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 CYP4F22Q6NT55 531 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ELMSAN1Q6PJG2 1045 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ANKRD35Q8N283 1001 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 NLGN2Q8NFZ4 835 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 CCDC47Q96A33 483 aaKnown RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 TRIM47Q96LD4 638 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 LRFN2Q9ULH4 789 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 MCTP1Q6DN14 999 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 IQCA1Q86XH1 822 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 DZIP1LQ8IYY4 767 aaKnown RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 MCM9Q9NXL9 1143 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 USP19O94966 1318 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 AATKQ6ZMQ8 1374 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 NKTRP30414 1462 aaKnown RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 PTPDC1A2A3K4 754 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 H3BQV1 296 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 TTF1Q15361 905 aaPredicted RBP4.36□□□□□ -1.71
LINC01278-202ENST00000608623 IFFO2Q5TF58 517 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 MIGA2Q7L4E1 593 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 RNF169Q8NCN4 708 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 PLBD2Q8NHP8 589 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 MYO3BQ8WXR4 1341 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 AGLP35573 1532 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 ANKRD36BQ8N2N9 1353 aa4.36□□□□□ -1.71
LINC01278-202ENST00000608623 NCOA3Q9Y6Q9 1424 aa4.35□□□□□ -1.71
LINC01278-202ENST00000608623 EIF4E1BA6NMX2 242 aaKnown RBP4.35□□□□□ -1.71
LINC01278-202ENST00000608623 F6X3S4 739 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms