RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
CTSA-218ENST00000607814 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 SHTN1A0MZ66 631 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
CTSA-218ENST00000607814 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
CTSA-218ENST00000607814 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
CTSA-218ENST00000607814 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 PRPF38BQ5VTL8 546 aaKnown RBP17.54■□□□□ 0.4
CTSA-218ENST00000607814 ANKRD13DQ6ZTN6 518 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 SAMD7Q7Z3H4 446 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 AKAP11Q9UKA4 1901 aa17.54■□□□□ 0.4
CTSA-218ENST00000607814 PSMD14O00487 310 aa17.53■□□□□ 0.4
CTSA-218ENST00000607814 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
CTSA-218ENST00000607814 HYPKQ9NX55 129 aa17.53■□□□□ 0.4
CTSA-218ENST00000607814 TRMT112Q9UI30 125 aaKnown RBP17.53■□□□□ 0.4
CTSA-218ENST00000607814 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
CTSA-218ENST00000607814 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
CTSA-218ENST00000607814 POLR2AP24928 1970 aaKnown RBP17.52■□□□□ 0.4
CTSA-218ENST00000607814 TRPA1O75762 1119 aa17.52■□□□□ 0.4
CTSA-218ENST00000607814 SOX10P56693 466 aa17.52■□□□□ 0.4
CTSA-218ENST00000607814 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
CTSA-218ENST00000607814 TBC1D10BQ4KMP7 808 aaPredicted RBP17.52■□□□□ 0.4
CTSA-218ENST00000607814 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.4
CTSA-218ENST00000607814 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.4
CTSA-218ENST00000607814 SLC10A3P09131 477 aa17.51■□□□□ 0.39
CTSA-218ENST00000607814 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
CTSA-218ENST00000607814 RIC3Q7Z5B4 369 aa17.51■□□□□ 0.39
CTSA-218ENST00000607814 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
CTSA-218ENST00000607814 IL16Q14005 1332 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 PKN2Q16513 984 aaKnown RBP17.5■□□□□ 0.39
CTSA-218ENST00000607814 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 DLK2Q6UY11 383 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 G2E3Q7L622 706 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 SULF1Q8IWU6 871 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
CTSA-218ENST00000607814 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 EYA3Q99504 573 aa17.5■□□□□ 0.39
CTSA-218ENST00000607814 NSFL1CQ9UNZ2 370 aaKnown RBP17.5■□□□□ 0.39
CTSA-218ENST00000607814 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
CTSA-218ENST00000607814 EGFRP00533 1210 aa17.49■□□□□ 0.39
CTSA-218ENST00000607814 FKBP1BP68106 108 aa17.49■□□□□ 0.39
CTSA-218ENST00000607814 FAM89AQ96GI7 184 aa17.49■□□□□ 0.39
CTSA-218ENST00000607814 MYD88Q99836 296 aa17.49■□□□□ 0.39
CTSA-218ENST00000607814 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
CTSA-218ENST00000607814 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
CTSA-218ENST00000607814 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
CTSA-218ENST00000607814 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
CTSA-218ENST00000607814 KIF4BQ2VIQ3 1234 aa17.48■□□□□ 0.39
CTSA-218ENST00000607814 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
CTSA-218ENST00000607814 C6orf229H3BNL8 230 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 ECE2O60344 883 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 VAMP4O75379 141 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 VIL1P09327 827 aaKnown RBP17.47■□□□□ 0.39
CTSA-218ENST00000607814 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
CTSA-218ENST00000607814 MIER1Q8N108 512 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 POLLQ9UGP5 575 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 TAF1P21675 1872 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 ZNF609O15014 1411 aa17.47■□□□□ 0.39
CTSA-218ENST00000607814 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
CTSA-218ENST00000607814 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
CTSA-218ENST00000607814 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
CTSA-218ENST00000607814 RASAL3Q86YV0 1011 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 CELF1Q92879 486 aaKnown RBP17.45■□□□□ 0.38
CTSA-218ENST00000607814 CDCA5Q96FF9 252 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
CTSA-218ENST00000607814 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
CTSA-218ENST00000607814 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
CTSA-218ENST00000607814 GPSM2P81274 684 aa17.44■□□□□ 0.38
CTSA-218ENST00000607814 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
CTSA-218ENST00000607814 AGBL3Q8NEM8 1001 aa17.44■□□□□ 0.38
CTSA-218ENST00000607814 TBC1D16Q8TBP0 767 aa17.44■□□□□ 0.38
CTSA-218ENST00000607814 KCNQ5Q9NR82 932 aa17.44■□□□□ 0.38
CTSA-218ENST00000607814 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
CTSA-218ENST00000607814 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
CTSA-218ENST00000607814 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
CTSA-218ENST00000607814 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
CTSA-218ENST00000607814 ZNF521Q96K83 1311 aa17.43■□□□□ 0.38
CTSA-218ENST00000607814 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
CTSA-218ENST00000607814 PAPPA2Q9BXP8 1791 aa17.43■□□□□ 0.38
CTSA-218ENST00000607814 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
CTSA-218ENST00000607814 KSR2Q6VAB6 950 aa17.42■□□□□ 0.38
CTSA-218ENST00000607814 METTL22Q9BUU2 404 aaPredicted RBP17.42■□□□□ 0.38
CTSA-218ENST00000607814 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
CTSA-218ENST00000607814 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
CTSA-218ENST00000607814 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
CTSA-218ENST00000607814 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
CTSA-218ENST00000607814 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
CTSA-218ENST00000607814 CWF19L2Q2TBE0 894 aaKnown RBP17.41■□□□□ 0.38
CTSA-218ENST00000607814 ANGEL2Q5VTE6 544 aaKnown RBP17.41■□□□□ 0.38
CTSA-218ENST00000607814 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
CTSA-218ENST00000607814 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms