RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 NLRP10Q86W26 655 aa8.35□□□□□ -1.07
CDC40-207ENST00000606893 UTP14AQ9BVJ6 771 aaKnown RBP8.35□□□□□ -1.07
CDC40-207ENST00000606893 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
CDC40-207ENST00000606893 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
CDC40-207ENST00000606893 A0A087WWV3 80 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 G3BP1Q13283 466 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDC40-207ENST00000606893 PPP4R3BQ5MIZ7 849 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 IL25Q9H293 177 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 ABCC4O15439 1325 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 PNPLA7Q6ZV29 1317 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 COL22A1Q8NFW1 1626 aaPredicted RBP8.34□□□□□ -1.07
CDC40-207ENST00000606893 TIMM10P62072 90 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 CCDC57Q2TAC2 916 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 LRRC24Q50LG9 513 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 ZNF526Q8TF50 670 aaPredicted RBP8.34□□□□□ -1.07
CDC40-207ENST00000606893 PLEKHG2Q9H7P9 1386 aa8.34□□□□□ -1.07
CDC40-207ENST00000606893 DOT1LQ8TEK3 1739 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 DDR1Q08345 913 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 GORABQ5T7V8 394 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 CEP85Q6P2H3 762 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 TPTE2Q6XPS3 522 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 LDHAL6AQ6ZMR3 332 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 SMAP1Q8IYB5 467 aaPredicted RBP8.33□□□□□ -1.08
CDC40-207ENST00000606893 MPHOSPH8Q99549 860 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 ANKIB1Q9P2G1 1089 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 ST18O60284 1047 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 HDAC1Q13547 482 aaPredicted RBP8.33□□□□□ -1.08
CDC40-207ENST00000606893 SLC4A8Q2Y0W8 1093 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 RGPD1P0DJD0 1748 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 PLSCR1O15162 318 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
CDC40-207ENST00000606893 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
CDC40-207ENST00000606893 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
CDC40-207ENST00000606893 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
CDC40-207ENST00000606893 NARFQ9UHQ1 456 aa8.33□□□□□ -1.08
CDC40-207ENST00000606893 DDX11L8A8MPP1 907 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 G3V3G9 751 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 ITGA6P23229 1130 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 DCAF8Q5TAQ9 597 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 NLRP3Q96P20 1036 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 KIF2CQ99661 725 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 BOLA2Q9H3K6 86 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 SCAF8Q9UPN6 1271 aaKnown RBP8.32□□□□□ -1.08
CDC40-207ENST00000606893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
CDC40-207ENST00000606893 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 TTC22Q5TAA0 569 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 CELF1Q92879 486 aaKnown RBP8.32□□□□□ -1.08
CDC40-207ENST00000606893 DDX11Q96FC9 970 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 SH3TC1Q8TE82 1336 aa8.32□□□□□ -1.08
CDC40-207ENST00000606893 C21orf2O43822 256 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 IFIT5Q13325 482 aaKnown RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 COL9A3Q14050 684 aaPredicted RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 BMP2KLQ5H9B9 411 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 SLC27A3Q5K4L6 730 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 CCDC83Q8IWF9 413 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 ANKRD44Q8N8A2 993 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 ERCC4Q92889 916 aaPredicted RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 SECISBP2LQ93073 1101 aaKnown RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 NRAPQ86VF7 1730 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 F8W031 263 aaPredicted RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 NLGN2Q8NFZ4 835 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 USP42Q9H9J4 1324 aaKnown RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 ABCC6O95255 1503 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 IGSF3O75054 1194 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 PDE1AP54750 535 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 CHST3Q7LGC8 479 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 LRP10Q7Z4F1 713 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 CLASRPQ8N2M8 674 aaKnown RBP8.31□□□□□ -1.08
CDC40-207ENST00000606893 GPATCH3Q96I76 525 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 RBSNQ9H1K0 784 aa8.31□□□□□ -1.08
CDC40-207ENST00000606893 MYH14Q7Z406 1995 aaKnown RBP8.3□□□□□ -1.08
CDC40-207ENST00000606893 POLD1P28340 1107 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 MRE11P49959 708 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 METTL24Q5JXM2 366 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 PRPF40BQ6NWY9 871 aaKnown RBP8.3□□□□□ -1.08
CDC40-207ENST00000606893 CERS3Q8IU89 383 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 LRRCC1Q9C099 1032 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 IFIT2P09913 472 aaKnown RBP8.3□□□□□ -1.08
CDC40-207ENST00000606893 ATP8B2P98198 1209 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 C2CD5Q86YS7 1000 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 TMX3Q96JJ7 454 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 MX1P20591 662 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 DOK7Q18PE1 504 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 PI16Q6UXB8 463 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 DDX46Q7L014 1031 aaKnown RBP8.3□□□□□ -1.08
CDC40-207ENST00000606893 VPS37DQ86XT2 251 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 KAZALD1Q96I82 304 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 CNPY2Q9Y2B0 182 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 CARMIL3Q8ND23 1372 aa8.3□□□□□ -1.08
CDC40-207ENST00000606893 ITGB4P16144 1822 aa8.29□□□□□ -1.08
CDC40-207ENST00000606893 CEP350Q5VT06 3117 aa8.29□□□□□ -1.08
CDC40-207ENST00000606893 ERC2O15083 957 aa8.29□□□□□ -1.08
CDC40-207ENST00000606893 ST5P78524 1137 aa8.29□□□□□ -1.08
CDC40-207ENST00000606893 FKBP4Q02790 459 aaKnown RBP eCLIP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms