RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
CTSA-213ENST00000606782 PSMD14O00487 310 aa17.06■□□□□ 0.32
CTSA-213ENST00000606782 RPS12P25398 132 aaKnown RBP17.06■□□□□ 0.32
CTSA-213ENST00000606782 VEGFBP49765 207 aa17.06■□□□□ 0.32
CTSA-213ENST00000606782 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
CTSA-213ENST00000606782 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
CTSA-213ENST00000606782 GCKRQ14397 625 aa17.06■□□□□ 0.32
CTSA-213ENST00000606782 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
CTSA-213ENST00000606782 ZC3H12CQ9C0D7 883 aaKnown RBP17.06■□□□□ 0.32
CTSA-213ENST00000606782 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
CTSA-213ENST00000606782 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 H7C1D1 291 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 ECE2O60344 883 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 CASP7P55210 303 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 DEFB115Q30KQ5 88 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
CTSA-213ENST00000606782 CST9Q5W186 159 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 CDC5LQ99459 802 aaKnown RBP17.05■□□□□ 0.32
CTSA-213ENST00000606782 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
CTSA-213ENST00000606782 ANKIB1Q9P2G1 1089 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 GGA1Q9UJY5 639 aa17.05■□□□□ 0.32
CTSA-213ENST00000606782 MYH3P11055 1940 aa17.04■□□□□ 0.32
CTSA-213ENST00000606782 XDHP47989 1333 aa17.04■□□□□ 0.32
CTSA-213ENST00000606782 UFL1O94874 794 aa17.04■□□□□ 0.32
CTSA-213ENST00000606782 VIL1P09327 827 aaKnown RBP17.04■□□□□ 0.32
CTSA-213ENST00000606782 FMR1Q06787 632 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSA-213ENST00000606782 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
CTSA-213ENST00000606782 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
CTSA-213ENST00000606782 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
CTSA-213ENST00000606782 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
CTSA-213ENST00000606782 ZNF609O15014 1411 aa17.04■□□□□ 0.32
CTSA-213ENST00000606782 TRPM7Q96QT4 1865 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 SHTN1A0MZ66 631 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 TRAF5O00463 557 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 CSF1RP07333 972 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
CTSA-213ENST00000606782 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 MICALL2Q8IY33 904 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 GPR101Q96P66 508 aaPredicted RBP17.03■□□□□ 0.32
CTSA-213ENST00000606782 GREM2Q9H772 168 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 MINPP1Q9UNW1 487 aa17.03■□□□□ 0.32
CTSA-213ENST00000606782 SCN9AQ15858 1988 aa17.02■□□□□ 0.32
CTSA-213ENST00000606782 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
CTSA-213ENST00000606782 HNRNPUQ00839 825 aaKnown RBP eCLIP17.02■□□□□ 0.32
CTSA-213ENST00000606782 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
CTSA-213ENST00000606782 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
CTSA-213ENST00000606782 ABT1Q9ULW3 272 aaKnown RBP17.01■□□□□ 0.31
CTSA-213ENST00000606782 TLL2Q9Y6L7 1015 aa17.01■□□□□ 0.31
CTSA-213ENST00000606782 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
CTSA-213ENST00000606782 SAMD7Q7Z3H4 446 aa17■□□□□ 0.31
CTSA-213ENST00000606782 PODNQ7Z5L7 613 aa17■□□□□ 0.31
CTSA-213ENST00000606782 GLIS2Q9BZE0 524 aaPredicted RBP17■□□□□ 0.31
CTSA-213ENST00000606782 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
CTSA-213ENST00000606782 AGBL3Q8NEM8 1001 aa16.99■□□□□ 0.31
CTSA-213ENST00000606782 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
CTSA-213ENST00000606782 GMLQ99445 158 aa16.99■□□□□ 0.31
CTSA-213ENST00000606782 PSME4Q14997 1843 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 G3V3G9 751 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 FOXN1O15353 648 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 EGFRP00533 1210 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
CTSA-213ENST00000606782 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
CTSA-213ENST00000606782 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 SAPCD2Q86UD0 394 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 MED23Q9ULK4 1368 aa16.98■□□□□ 0.31
CTSA-213ENST00000606782 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
CTSA-213ENST00000606782 F6X3S4 739 aa16.97■□□□□ 0.31
CTSA-213ENST00000606782 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
CTSA-213ENST00000606782 ITGA6P23229 1130 aa16.97■□□□□ 0.31
CTSA-213ENST00000606782 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
CTSA-213ENST00000606782 ECE1P42892 770 aa16.97■□□□□ 0.31
CTSA-213ENST00000606782 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
CTSA-213ENST00000606782 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
CTSA-213ENST00000606782 CAPNS2Q96L46 248 aa16.97■□□□□ 0.31
CTSA-213ENST00000606782 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
CTSA-213ENST00000606782 LEMD3Q9Y2U8 911 aa16.97■□□□□ 0.31
CTSA-213ENST00000606782 THSD7BQ9C0I4 1608 aa16.96■□□□□ 0.31
CTSA-213ENST00000606782 FOXO4P98177 505 aa16.96■□□□□ 0.31
CTSA-213ENST00000606782 MAP2K1Q02750 393 aaPredicted RBP16.96■□□□□ 0.31
CTSA-213ENST00000606782 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
CTSA-213ENST00000606782 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
CTSA-213ENST00000606782 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
CTSA-213ENST00000606782 ANKRD2Q9GZV1 360 aa16.96■□□□□ 0.31
CTSA-213ENST00000606782 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.3
CTSA-213ENST00000606782 POLR2AP24928 1970 aaKnown RBP16.95■□□□□ 0.3
CTSA-213ENST00000606782 USP17L3A6NCW0 530 aa16.95■□□□□ 0.3
CTSA-213ENST00000606782 USP17L4A6NCW7 530 aa16.95■□□□□ 0.3
CTSA-213ENST00000606782 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
CTSA-213ENST00000606782 USP17L1Q7RTZ2 530 aa16.95■□□□□ 0.3
CTSA-213ENST00000606782 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
CTSA-213ENST00000606782 TNS4Q8IZW8 715 aa16.95■□□□□ 0.3
CTSA-213ENST00000606782 E9PSI1 815 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 MAP2K2P36507 400 aa16.94■□□□□ 0.3
CTSA-213ENST00000606782 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms