RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 CLSTN2Q9H4D0 955 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 ZSCAN16Q9H4T2 348 aaPredicted RBP8.56□□□□□ -1.04
SATB1-218ENST00000606296 TAF6LQ9Y6J9 622 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 NEO1Q92859 1461 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 SASH1O94885 1247 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 ARID5BQ14865 1188 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 TTC14Q96N46 770 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 IFNKQ9P0W0 207 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
SATB1-218ENST00000606296 PTPN21Q16825 1174 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 TNNI3KQ59H18 835 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 METTL24Q5JXM2 366 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 CPLX3Q8WVH0 158 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 UBXN4Q92575 508 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 DDX17Q92841 729 aaKnown RBP8.56□□□□□ -1.04
SATB1-218ENST00000606296 MAP4K1Q92918 833 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 ZNF496Q96IT1 587 aaPredicted RBP8.56□□□□□ -1.04
SATB1-218ENST00000606296 PAG1Q9NWQ8 432 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 FPGT-TNNI3KV9GXZ4 949 aa8.56□□□□□ -1.04
SATB1-218ENST00000606296 LMTK2Q8IWU2 1503 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 ABCA9Q8IUA7 1624 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 POLA2Q14181 598 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 ZSCAN25Q6NSZ9 544 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 KIAA1524Q8TCG1 905 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 TM6SF1Q9BZW5 370 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 A2ML1A8K2U0 1454 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 CTAGE5O15320 804 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 SNRPA1P09661 255 aaKnown RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 PDIA4P13667 645 aaKnown RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 TNNT3P45378 269 aaPredicted RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 ZNF790Q6PG37 636 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 MRPS27Q92552 414 aaKnown RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 USP28Q96RU2 1077 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 ARGLU1Q9NWB6 273 aaPredicted RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 CRB1P82279 1406 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 ADGRB2O60241 1585 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 VWDEQ8N2E2 1590 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 ZNF213O14771 459 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
SATB1-218ENST00000606296 GCKRQ14397 625 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 DNAI1Q9UI46 699 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 CTNNA3Q9UI47 895 aa8.55□□□□□ -1.04
SATB1-218ENST00000606296 NECTIN1Q15223 517 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 SYT10Q6XYQ8 523 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 CACTINQ8WUQ7 758 aaKnown RBP8.54□□□□□ -1.04
SATB1-218ENST00000606296 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 PRDM11Q9NQV5 511 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
SATB1-218ENST00000606296 ARHGAP31Q2M1Z3 1444 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 MROH1Q8NDA8 1641 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 ERICH2A1L162 156 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 GTF2E1P29083 439 aaPredicted RBP8.54□□□□□ -1.04
SATB1-218ENST00000606296 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
SATB1-218ENST00000606296 TBC1D2BQ9UPU7 963 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 TBX22Q9Y458 520 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 TAF5LO75529 589 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
SATB1-218ENST00000606296 SMTNL1A8MU46 457 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 CYP21A2P08686 494 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 TEX35Q5T0J7 233 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 PAXBP1Q9Y5B6 917 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 PIK3C2BO00750 1634 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 NEURL1BA8MQ27 555 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 PRC1O43663 620 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 EPHA10Q5JZY3 1008 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 C11orf57Q6ZUT1 292 aaPredicted RBP8.53□□□□□ -1.04
SATB1-218ENST00000606296 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
SATB1-218ENST00000606296 DEPDC5O75140 1603 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 TSPOAP1O95153 1857 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 PPLO60437 1756 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 TOP1P11387 765 aaKnown RBP8.53□□□□□ -1.04
SATB1-218ENST00000606296 SCRN1Q12765 414 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 ELF2Q15723 593 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 SPECC1Q5M775 1068 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 SMAP1Q8IYB5 467 aaPredicted RBP8.53□□□□□ -1.04
SATB1-218ENST00000606296 CNNM3Q8NE01 707 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
SATB1-218ENST00000606296 HOOK1Q9UJC3 728 aaKnown RBP8.53□□□□□ -1.04
SATB1-218ENST00000606296 SPTLC2O15270 562 aa8.53□□□□□ -1.04
SATB1-218ENST00000606296 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.53□□□□□ -1.04
SATB1-218ENST00000606296 A1BGP04217 495 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 SYKP43405 635 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 UBASH3AP57075 661 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 KIF6Q6ZMV9 814 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 AIDAQ96BJ3 306 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 ZFP91Q96JP5 570 aaPredicted RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 GJB4Q9NTQ9 266 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 ARHGEF28Q8N1W1 1705 aaKnown RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 TDO2P48775 406 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 FAM160A1Q05DH4 1040 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 ATP2B3Q16720 1220 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 LDHAL6AQ6ZMR3 332 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 SIRT1Q96EB6 747 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 KCNF1Q9H3M0 494 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms