RNA–Protein interactions for RNA: ENST00000606170.1

PRDM16-209, Transcript of PR/SET domain 16, humanhuman

TSL 4

Gene PRDM16, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-209ENST00000606170 GPRC5DQ9NZD1 345 aa21.37■■□□□ 1.01
PRDM16-209ENST00000606170 G3V3G9 751 aa21.36■■□□□ 1.01
PRDM16-209ENST00000606170 DCAF8Q5TAQ9 597 aa21.36■■□□□ 1.01
PRDM16-209ENST00000606170 SLC4A10Q6U841 1118 aa21.36■■□□□ 1.01
PRDM16-209ENST00000606170 USP50Q70EL3 339 aaPredicted RBP21.36■■□□□ 1.01
PRDM16-209ENST00000606170 CNTROBQ8N137 903 aa21.36■■□□□ 1.01
PRDM16-209ENST00000606170 PLA2G12BQ9BX93 195 aa21.36■■□□□ 1.01
PRDM16-209ENST00000606170 ECE2O60344 883 aa21.35■■□□□ 1.01
PRDM16-209ENST00000606170 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
PRDM16-209ENST00000606170 CDCA7LQ96GN5 454 aa21.35■■□□□ 1.01
PRDM16-209ENST00000606170 ADARB2Q9NS39 739 aaKnown RBP21.35■■□□□ 1.01
PRDM16-209ENST00000606170 XDHP47989 1333 aa21.34■■□□□ 1.01
PRDM16-209ENST00000606170 PASKQ96RG2 1323 aa21.34■■□□□ 1.01
PRDM16-209ENST00000606170 ITGBL1O95965 494 aaPredicted RBP21.34■■□□□ 1.01
PRDM16-209ENST00000606170 ITGA6P23229 1130 aa21.34■■□□□ 1.01
PRDM16-209ENST00000606170 IGHMBP2P38935 993 aaKnown RBP21.34■■□□□ 1.01
PRDM16-209ENST00000606170 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
PRDM16-209ENST00000606170 BSDC1Q9NW68 430 aaPredicted RBP21.34■■□□□ 1.01
PRDM16-209ENST00000606170 ZBTB12Q9Y330 459 aaPredicted RBP21.34■■□□□ 1.01
PRDM16-209ENST00000606170 RTL9Q8NET4 1388 aa21.34■■□□□ 1.01
PRDM16-209ENST00000606170 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1.01
PRDM16-209ENST00000606170 PSMD14O00487 310 aa21.33■■□□□ 1.01
PRDM16-209ENST00000606170 ATP2B4P23634 1241 aa21.33■■□□□ 1.01
PRDM16-209ENST00000606170 CREBZFQ9NS37 354 aa21.33■■□□□ 1.01
PRDM16-209ENST00000606170 MINPP1Q9UNW1 487 aa21.33■■□□□ 1.01
PRDM16-209ENST00000606170 MYH3P11055 1940 aa21.33■■□□□ 1
PRDM16-209ENST00000606170 CSF1RP07333 972 aa21.32■■□□□ 1
PRDM16-209ENST00000606170 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
PRDM16-209ENST00000606170 KCNQ5Q9NR82 932 aa21.32■■□□□ 1
PRDM16-209ENST00000606170 GRM8O00222 908 aa21.31■■□□□ 1
PRDM16-209ENST00000606170 MPHOSPH8Q99549 860 aa21.31■■□□□ 1
PRDM16-209ENST00000606170 SRCIN1Q9C0H9 1055 aa21.31■■□□□ 1
PRDM16-209ENST00000606170 C9orf78Q9NZ63 289 aaPredicted RBP21.31■■□□□ 1
PRDM16-209ENST00000606170 CNOT7Q9UIV1 285 aaKnown RBP21.31■■□□□ 1
PRDM16-209ENST00000606170 CHMP3Q9Y3E7 222 aa21.31■■□□□ 1
PRDM16-209ENST00000606170 SHTN1A0MZ66 631 aa21.3■■□□□ 1
PRDM16-209ENST00000606170 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 WTIPA6NIX2 430 aaPredicted RBP21.29■■□□□ 1
PRDM16-209ENST00000606170 TMEM88BA6NKF7 163 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 H7C1D1 291 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 ALDH1L1O75891 902 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 FOXO4P98177 505 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 MICALL2Q8IY33 904 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 JMYQ8N9B5 988 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 SSH1Q8WYL5 1049 aa21.29■■□□□ 1
PRDM16-209ENST00000606170 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
PRDM16-209ENST00000606170 SPEF2Q9C093 1822 aa21.28■■□□□ 1
PRDM16-209ENST00000606170 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
PRDM16-209ENST00000606170 TRPM4Q8TD43 1214 aa21.28■■□□□ 1
PRDM16-209ENST00000606170 DPF2Q92785 391 aa21.28■■□□□ 1
PRDM16-209ENST00000606170 IFIT5Q13325 482 aaKnown RBP21.27■■□□□ 1
PRDM16-209ENST00000606170 LMBR1LQ6UX01 489 aa21.27■■□□□ 1
PRDM16-209ENST00000606170 RPS12P25398 132 aaKnown RBP21.26■□□□□ 0.99
PRDM16-209ENST00000606170 HIRAP54198 1017 aaPredicted RBP21.26■□□□□ 0.99
PRDM16-209ENST00000606170 FMR1Q06787 632 aaKnown RBP eCLIP21.26■□□□□ 0.99
PRDM16-209ENST00000606170 EPHA10Q5JZY3 1008 aa21.26■□□□□ 0.99
PRDM16-209ENST00000606170 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
PRDM16-209ENST00000606170 PTPRCP08575 1304 aa21.26■□□□□ 0.99
PRDM16-209ENST00000606170 TRAF5O00463 557 aa21.25■□□□□ 0.99
PRDM16-209ENST00000606170 VIL1P09327 827 aaKnown RBP21.25■□□□□ 0.99
PRDM16-209ENST00000606170 RBM26Q5T8P6 1007 aaKnown RBP21.25■□□□□ 0.99
PRDM16-209ENST00000606170 SAMD7Q7Z3H4 446 aa21.25■□□□□ 0.99
PRDM16-209ENST00000606170 TRMT2AQ8IZ69 625 aaKnown RBP21.25■□□□□ 0.99
PRDM16-209ENST00000606170 ANKRD2Q9GZV1 360 aa21.25■□□□□ 0.99
PRDM16-209ENST00000606170 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
PRDM16-209ENST00000606170 LEMD3Q9Y2U8 911 aa21.25■□□□□ 0.99
PRDM16-209ENST00000606170 MED23Q9ULK4 1368 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 PCNTO95613 3336 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 KCNJ4P48050 445 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 CHRNDQ07001 517 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 CCDC57Q2TAC2 916 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 ALDH1L2Q3SY69 923 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 TBC1D10BQ4KMP7 808 aaPredicted RBP21.24■□□□□ 0.99
PRDM16-209ENST00000606170 TAF7LQ5H9L4 462 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 PODNQ7Z5L7 613 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 MIER1Q8N108 512 aa21.24■□□□□ 0.99
PRDM16-209ENST00000606170 NBPF7P0C2Y1 421 aaPredicted RBP21.23■□□□□ 0.99
PRDM16-209ENST00000606170 ZC3H15Q8WU90 426 aaKnown RBP21.23■□□□□ 0.99
PRDM16-209ENST00000606170 SUCLG2Q96I99 432 aa21.23■□□□□ 0.99
PRDM16-209ENST00000606170 ABT1Q9ULW3 272 aaKnown RBP21.23■□□□□ 0.99
PRDM16-209ENST00000606170 ZNF804BA4D1E1 1349 aa21.23■□□□□ 0.99
PRDM16-209ENST00000606170 CNTNAP1P78357 1384 aa21.23■□□□□ 0.99
PRDM16-209ENST00000606170 RSBN1LQ6PCB5 846 aaPredicted RBP21.22■□□□□ 0.99
PRDM16-209ENST00000606170 FBXW7Q969H0 707 aa21.22■□□□□ 0.99
PRDM16-209ENST00000606170 ZNF594Q96JF6 807 aaPredicted RBP21.22■□□□□ 0.99
PRDM16-209ENST00000606170 GLIS2Q9BZE0 524 aaPredicted RBP21.22■□□□□ 0.99
PRDM16-209ENST00000606170 PGAP2Q9UHJ9 254 aa21.22■□□□□ 0.99
PRDM16-209ENST00000606170 SCN9AQ15858 1988 aa21.22■□□□□ 0.99
PRDM16-209ENST00000606170 USP17L3A6NCW0 530 aa21.21■□□□□ 0.99
PRDM16-209ENST00000606170 USP17L4A6NCW7 530 aa21.21■□□□□ 0.99
PRDM16-209ENST00000606170 TAF5LO75529 589 aa21.21■□□□□ 0.99
PRDM16-209ENST00000606170 EGFRP00533 1210 aa21.21■□□□□ 0.99
PRDM16-209ENST00000606170 USP17L1Q7RTZ2 530 aa21.21■□□□□ 0.99
PRDM16-209ENST00000606170 TXNRD3Q86VQ6 643 aa21.21■□□□□ 0.99
PRDM16-209ENST00000606170 HELBQ8NG08 1087 aaPredicted RBP21.21■□□□□ 0.99
PRDM16-209ENST00000606170 KLRK1P26718 216 aa21.2■□□□□ 0.98
PRDM16-209ENST00000606170 LDHAL6AQ6ZMR3 332 aa21.2■□□□□ 0.98
PRDM16-209ENST00000606170 COA1Q9GZY4 146 aa21.2■□□□□ 0.98
PRDM16-209ENST00000606170 SNAP23O00161 211 aa21.19■□□□□ 0.98
PRDM16-209ENST00000606170 CT47B1P0C2W7 299 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms