RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 PPEF1O14829 653 aaPredicted RBP8.92□□□□□ -0.98
LINC00458-204ENST00000606055 LMNB1P20700 586 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 ITGA6P23229 1130 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 IGHMBP2P38935 993 aaKnown RBP8.92□□□□□ -0.98
LINC00458-204ENST00000606055 IL15P40933 162 aaPredicted RBP8.92□□□□□ -0.98
LINC00458-204ENST00000606055 RPS8P62241 208 aaKnown RBP8.92□□□□□ -0.98
LINC00458-204ENST00000606055 RASSF7Q02833 373 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 PTPN12Q05209 780 aaKnown RBP8.92□□□□□ -0.98
LINC00458-204ENST00000606055 C9orf131Q5VYM1 1079 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 C3orf67Q6ZVT6 689 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 ANKRD18AQ8IVF6 992 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 SIRT2Q8IXJ6 389 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 RTKN2Q8IZC4 609 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 VPS33BQ9H267 617 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 TAOK3Q9H2K8 898 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 GPR108Q9NPR9 543 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 PPP4R2Q9NY27 417 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 RNF181Q9P0P0 153 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 PCDHB15Q9Y5E8 787 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 EYA2O00167 538 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 FAM161AQ3B820 660 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 SP8Q8IXZ3 490 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 SMC5Q8IY18 1101 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 JARID2Q92833 1246 aaPredicted RBP8.91□□□□□ -0.98
LINC00458-204ENST00000606055 ANKRD2Q9GZV1 360 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 GREM2Q9H772 168 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
LINC00458-204ENST00000606055 LTBP3Q9NS15 1303 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 SCN4AP35499 1836 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 PNMA6EA0A0J9YXQ4 647 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 NFKBIEO00221 500 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 IGSF3O75054 1194 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 FKBP4Q02790 459 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC00458-204ENST00000606055 C15orf52Q6ZUT6 534 aaKnown RBP8.9□□□□□ -0.98
LINC00458-204ENST00000606055 C7orf43Q8WVR3 580 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 MPHOSPH8Q99549 860 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 ATP6V0A2Q9Y487 856 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 RIPOR2Q9Y4F9 1068 aa8.9□□□□□ -0.98
LINC00458-204ENST00000606055 MYH13Q9UKX3 1938 aa8.9□□□□□ -0.99
LINC00458-204ENST00000606055 PSME4Q14997 1843 aa8.89□□□□□ -0.99
LINC00458-204ENST00000606055 ZC3H4Q9UPT8 1303 aaKnown RBP8.89□□□□□ -0.99
LINC00458-204ENST00000606055 G3BP1Q13283 466 aaKnown RBP eCLIP8.89□□□□□ -0.99
LINC00458-204ENST00000606055 TAF7LQ5H9L4 462 aa8.89□□□□□ -0.99
LINC00458-204ENST00000606055 LDHAL6AQ6ZMR3 332 aa8.89□□□□□ -0.99
LINC00458-204ENST00000606055 CENPQQ7L2Z9 268 aaPredicted RBP8.89□□□□□ -0.99
LINC00458-204ENST00000606055 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
LINC00458-204ENST00000606055 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
LINC00458-204ENST00000606055 RTFDC1Q9BY42 306 aaPredicted RBP8.89□□□□□ -0.99
LINC00458-204ENST00000606055 AKAP2Q9Y2D5 859 aa8.89□□□□□ -0.99
LINC00458-204ENST00000606055 SNED1Q8TER0 1413 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 KDM2BQ8NHM5 1336 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 UBE4AQ14139 1066 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 OLFM4Q6UX06 510 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 ATG9AQ7Z3C6 839 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 TICAM2Q86XR7 235 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 VGLL2Q8N8G2 317 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 SUPT20HQ8NEM7 779 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 ZNF526Q8TF50 670 aaPredicted RBP8.88□□□□□ -0.99
LINC00458-204ENST00000606055 CELF1Q92879 486 aaKnown RBP8.88□□□□□ -0.99
LINC00458-204ENST00000606055 PSMD1Q99460 953 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
LINC00458-204ENST00000606055 MINPP1Q9UNW1 487 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 LEMD3Q9Y2U8 911 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 CHMP3Q9Y3E7 222 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 COL4A1P02462 1669 aa8.88□□□□□ -0.99
LINC00458-204ENST00000606055 XDHP47989 1333 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 SURF6O75683 361 aaKnown RBP8.87□□□□□ -0.99
LINC00458-204ENST00000606055 PDE8BO95263 885 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 IARSP41252 1262 aaKnown RBP8.87□□□□□ -0.99
LINC00458-204ENST00000606055 DPP8Q6V1X1 898 aaPredicted RBP8.87□□□□□ -0.99
LINC00458-204ENST00000606055 MPNDQ8N594 471 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 C1orf115Q9H7X2 142 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 ZNF277Q9NRM2 450 aaPredicted RBP8.87□□□□□ -0.99
LINC00458-204ENST00000606055 CNNM1Q9NRU3 951 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 CEP126Q9P2H0 1117 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 WDR90Q96KV7 1748 aa8.87□□□□□ -0.99
LINC00458-204ENST00000606055 FGFR2P21802 821 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 ATP2B4P23634 1241 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 NUCB1Q02818 461 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 PUM3Q15397 648 aaKnown RBP8.86□□□□□ -0.99
LINC00458-204ENST00000606055 DPY19L2Q6NUT2 758 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 TMED8Q6PL24 325 aaPredicted RBP8.86□□□□□ -0.99
LINC00458-204ENST00000606055 JDP2Q8WYK2 163 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 LPIN2Q92539 896 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 CCDC136Q96JN2 1154 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 ZNF512BQ96KM6 892 aaPredicted RBP8.86□□□□□ -0.99
LINC00458-204ENST00000606055 LRRCC1Q9C099 1032 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 POLR2AP24928 1970 aaKnown RBP8.86□□□□□ -0.99
LINC00458-204ENST00000606055 DUOX1Q9NRD9 1551 aa8.86□□□□□ -0.99
LINC00458-204ENST00000606055 PDS5AQ29RF7 1337 aaKnown RBP8.85□□□□□ -0.99
LINC00458-204ENST00000606055 SCN9AQ15858 1988 aa8.85□□□□□ -0.99
LINC00458-204ENST00000606055 PPIP5K2O43314 1243 aa8.85□□□□□ -0.99
LINC00458-204ENST00000606055 SASH1O94885 1247 aa8.85□□□□□ -0.99
LINC00458-204ENST00000606055 PRELPP51888 382 aa8.85□□□□□ -0.99
LINC00458-204ENST00000606055 CHRNDQ07001 517 aa8.85□□□□□ -0.99
LINC00458-204ENST00000606055 NIM1KQ8IY84 436 aa8.85□□□□□ -0.99
LINC00458-204ENST00000606055 CLASRPQ8N2M8 674 aaKnown RBP8.85□□□□□ -0.99
LINC00458-204ENST00000606055 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms