RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 JARID2Q92833 1246 aaPredicted RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 JPH4Q96JJ6 628 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 MMTAG2Q9BU76 263 aaKnown RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 CEP152O94986 1710 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 NWD2Q9ULI1 1742 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 CHAF1AQ13111 956 aaPredicted RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 TTC19Q6DKK2 380 aaPredicted RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 STK11IPQ8N1F8 1099 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 TMC2Q8TDI7 906 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 TATDN2Q93075 761 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 CDHR1Q96JP9 859 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 XPO4Q9C0E2 1151 aaKnown RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 TBK1Q9UHD2 729 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 PZPP20742 1482 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 HOXD10P28358 340 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 COBLL1Q53SF7 1204 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 ANKRD45Q5TZF3 282 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 FAM117BQ6P1L5 589 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 FILIP1Q7Z7B0 1213 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 CASS4Q9NQ75 786 aa6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 MRPL42Q9Y6G3 142 aaKnown RBP6.86□□□□□ -1.31
COL4A3BP-207ENST00000604926 FOSP01100 380 aaPredicted RBP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 ERCC5P28715 1186 aaPredicted RBP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 GPSM2P81274 684 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 AKNAD1Q5T1N1 836 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 SLC43A3Q8NBI5 491 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 FLCNQ8NFG4 579 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 SMARCC1Q92922 1105 aaPredicted RBP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 DHRS1Q96LJ7 313 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 CHMP5Q9NZZ3 219 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 ZNF330Q9Y3S2 320 aaPredicted RBP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 RREB1Q92766 1687 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 TRIM37O94972 964 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 HOXA10P31260 410 aaPredicted RBP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 POU5F1BQ06416 359 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 NSUN2Q08J23 767 aaKnown RBP eCLIP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 ZFPM2Q8WW38 1151 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 THOC1Q96FV9 657 aaKnown RBP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 TMEM87BQ96K49 555 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 VEZTQ9HBM0 779 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 CALCOCO1Q9P1Z2 691 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 INTUQ9ULD6 942 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 ZNF652Q9Y2D9 606 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 IKBKGQ9Y6K9 419 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 FAM135BQ49AJ0 1406 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 TRPM1Q7Z4N2 1603 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 ABCA3Q99758 1704 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 GTF2F1P35269 517 aaKnown RBP eCLIP6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 FAM81BQ96LP2 452 aa6.85□□□□□ -1.31
COL4A3BP-207ENST00000604926 LRP6O75581 1613 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 TMEM110-MUSTN1A8MSY1 372 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 MYO1BO43795 1136 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 LLGL2Q6P1M3 1020 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 SNX32Q86XE0 403 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 WDR75Q8IWA0 830 aaKnown RBP6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 BHMTQ93088 406 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 ACAD8Q9UKU7 415 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 BBOX1O75936 387 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 KRT38O76015 456 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 TSPAN7P41732 249 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 PRPF4BQ13523 1007 aaKnown RBP6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 MCM10Q7L590 875 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 RUNDC1Q96C34 613 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 TBC1D31Q96DN5 1066 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 UNC45AQ9H3U1 944 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 ZSWIM4Q9H7M6 989 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 PPCSQ9HAB8 311 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 ASAP1Q9ULH1 1129 aa6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 ATP1B4Q9UN42 357 aaPredicted RBP6.84□□□□□ -1.31
COL4A3BP-207ENST00000604926 MAPRE1Q15691 268 aaKnown RBP6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 TMEM110Q86TL2 294 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 NLRP13Q86W25 1043 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 NCAPG2Q86XI2 1143 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 CCDC89Q8N998 374 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 DCAF16Q9NXF7 216 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 CPSF2Q9P2I0 782 aaKnown RBP6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 EVLQ9UI08 416 aaPredicted RBP6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 CFAP65Q6ZU64 1925 aaKnown RBP6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 DYNC1I1O14576 645 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 NPHP1O15259 732 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 SRGNP10124 158 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 GSCP56915 257 aaPredicted RBP6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 SESN3P58005 492 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 ODR4Q5SWX8 454 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 CCDC91Q7Z6B0 441 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 GIMAP1Q8WWP7 306 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 TBC1D20Q96BZ9 403 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 MAP3K14Q99558 947 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 CLIC5Q9NZA1 410 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 COG6Q9Y2V7 657 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 NALCNQ8IZF0 1738 aa6.83□□□□□ -1.32
COL4A3BP-207ENST00000604926 TRAF1Q13077 416 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms