RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ECE2O60344 883 aa27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 PI4KAP1Q8N8J0 262 aa27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 DPF2Q92785 391 aa27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 STK31Q9BXU1 1019 aa27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 ZC3H12CQ9C0D7 883 aaKnown RBP27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 KCNQ5Q9NR82 932 aa27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 ANKIB1Q9P2G1 1089 aa27.25■■□□□ 1.95
PPFIA3-209ENST00000602783 GRM1Q13255 1194 aa27.24■■□□□ 1.95
PPFIA3-209ENST00000602783 CAPNS2Q96L46 248 aa27.24■■□□□ 1.95
PPFIA3-209ENST00000602783 PODXL2Q9NZ53 605 aa27.24■■□□□ 1.95
PPFIA3-209ENST00000602783 TLL2Q9Y6L7 1015 aa27.24■■□□□ 1.95
PPFIA3-209ENST00000602783 TRPM7Q96QT4 1865 aa27.23■■□□□ 1.95
PPFIA3-209ENST00000602783 CELF2O95319 508 aaKnown RBP27.23■■□□□ 1.95
PPFIA3-209ENST00000602783 MAP2K1Q02750 393 aaPredicted RBP27.23■■□□□ 1.95
PPFIA3-209ENST00000602783 TWISTNBQ3B726 338 aaPredicted RBP27.23■■□□□ 1.95
PPFIA3-209ENST00000602783 CYP4F22Q6NT55 531 aa27.23■■□□□ 1.95
PPFIA3-209ENST00000602783 PRDM10Q9NQV6 1147 aa27.23■■□□□ 1.95
PPFIA3-209ENST00000602783 IL16Q14005 1332 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 UFL1O94874 794 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 IGKV5-2P06315 115 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 ECE1P42892 770 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 NCBP3Q53F19 620 aaKnown RBP27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 CDC37L1Q7L3B6 337 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 SAMD7Q7Z3H4 446 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 GGA1Q9UJY5 639 aa27.22■■□□□ 1.95
PPFIA3-209ENST00000602783 G3V3G9 751 aa27.21■■□□□ 1.95
PPFIA3-209ENST00000602783 NEXNQ0ZGT2 675 aa27.21■■□□□ 1.95
PPFIA3-209ENST00000602783 DCAF8Q5TAQ9 597 aa27.21■■□□□ 1.95
PPFIA3-209ENST00000602783 ANKRD18AQ8IVF6 992 aa27.21■■□□□ 1.95
PPFIA3-209ENST00000602783 SLC4A2P04920 1241 aa27.2■■□□□ 1.94
PPFIA3-209ENST00000602783 RPS12P25398 132 aaKnown RBP27.2■■□□□ 1.94
PPFIA3-209ENST00000602783 LBX1P52954 281 aa27.2■■□□□ 1.94
PPFIA3-209ENST00000602783 ZNF408Q9H9D4 720 aa27.2■■□□□ 1.94
PPFIA3-209ENST00000602783 SALL2Q9Y467 1007 aaPredicted RBP27.2■■□□□ 1.94
PPFIA3-209ENST00000602783 RTL9Q8NET4 1388 aa27.2■■□□□ 1.94
PPFIA3-209ENST00000602783 TBC1D10BQ4KMP7 808 aaPredicted RBP27.19■■□□□ 1.94
PPFIA3-209ENST00000602783 G2E3Q7L622 706 aa27.19■■□□□ 1.94
PPFIA3-209ENST00000602783 CWF19L2Q2TBE0 894 aaKnown RBP27.18■■□□□ 1.94
PPFIA3-209ENST00000602783 RBM26Q5T8P6 1007 aaKnown RBP27.18■■□□□ 1.94
PPFIA3-209ENST00000602783 SAPCD2Q86UD0 394 aa27.18■■□□□ 1.94
PPFIA3-209ENST00000602783 USP48Q86UV5 1035 aa27.18■■□□□ 1.94
PPFIA3-209ENST00000602783 FANCIQ9NVI1 1328 aa27.17■■□□□ 1.94
PPFIA3-209ENST00000602783 CTSWP56202 376 aa27.17■■□□□ 1.94
PPFIA3-209ENST00000602783 EGFRP00533 1210 aa27.16■■□□□ 1.94
PPFIA3-209ENST00000602783 VIL1P09327 827 aaKnown RBP27.16■■□□□ 1.94
PPFIA3-209ENST00000602783 TTLL11Q8NHH1 800 aa27.16■■□□□ 1.94
PPFIA3-209ENST00000602783 CDC5LQ99459 802 aaKnown RBP27.16■■□□□ 1.94
PPFIA3-209ENST00000602783 NEURL1BA8MQ27 555 aa27.15■■□□□ 1.94
PPFIA3-209ENST00000602783 HSPA8P11142 646 aaKnown RBP27.15■■□□□ 1.94
PPFIA3-209ENST00000602783 FAM9BQ8IZU0 186 aa27.15■■□□□ 1.94
PPFIA3-209ENST00000602783 CACNA1FO60840 1977 aa27.15■■□□□ 1.94
PPFIA3-209ENST00000602783 XDHP47989 1333 aa27.15■■□□□ 1.94
PPFIA3-209ENST00000602783 AOC2O75106 756 aa27.14■■□□□ 1.94
PPFIA3-209ENST00000602783 ATP2B4P23634 1241 aa27.14■■□□□ 1.94
PPFIA3-209ENST00000602783 DLK2Q6UY11 383 aa27.14■■□□□ 1.94
PPFIA3-209ENST00000602783 BEGAINQ9BUH8 593 aa27.14■■□□□ 1.94
PPFIA3-209ENST00000602783 WDR63Q8IWG1 891 aa27.13■■□□□ 1.93
PPFIA3-209ENST00000602783 GREM2Q9H772 168 aa27.13■■□□□ 1.93
PPFIA3-209ENST00000602783 SCN9AQ15858 1988 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 H7C1W4 665 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 MAP2K2P36507 400 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 FLIIQ13045 1269 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 UBE3BQ7Z3V4 1068 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 KRT26Q7Z3Y9 468 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 DCPSQ96C86 337 aaKnown RBP27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 HHIPL1Q96JK4 782 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 MYH3P11055 1940 aa27.12■■□□□ 1.93
PPFIA3-209ENST00000602783 KIF4BQ2VIQ3 1234 aa27.11■■□□□ 1.93
PPFIA3-209ENST00000602783 BSDC1Q9NW68 430 aaPredicted RBP27.11■■□□□ 1.93
PPFIA3-209ENST00000602783 MINPP1Q9UNW1 487 aa27.11■■□□□ 1.93
PPFIA3-209ENST00000602783 FKBP5Q13451 457 aaPredicted RBP27.1■■□□□ 1.93
PPFIA3-209ENST00000602783 POLR2AP24928 1970 aaKnown RBP27.09■■□□□ 1.93
PPFIA3-209ENST00000602783 WTIPA6NIX2 430 aaPredicted RBP27.09■■□□□ 1.93
PPFIA3-209ENST00000602783 GCKRQ14397 625 aa27.09■■□□□ 1.93
PPFIA3-209ENST00000602783 RSBN1LQ6PCB5 846 aaPredicted RBP27.09■■□□□ 1.93
PPFIA3-209ENST00000602783 VAMP4O75379 141 aa27.08■■□□□ 1.93
PPFIA3-209ENST00000602783 PODNQ7Z5L7 613 aa27.08■■□□□ 1.93
PPFIA3-209ENST00000602783 AGBL3Q8NEM8 1001 aa27.08■■□□□ 1.93
PPFIA3-209ENST00000602783 DNAAF4Q8WXU2 420 aa27.08■■□□□ 1.93
PPFIA3-209ENST00000602783 SPEF2Q9C093 1822 aa27.08■■□□□ 1.93
PPFIA3-209ENST00000602783 ADM5C9JUS6 153 aa27.07■■□□□ 1.92
PPFIA3-209ENST00000602783 HUNKP57058 714 aa27.07■■□□□ 1.92
PPFIA3-209ENST00000602783 EXOSC9Q06265 439 aaKnown RBP27.07■■□□□ 1.92
PPFIA3-209ENST00000602783 THSD7BQ9C0I4 1608 aa27.07■■□□□ 1.92
PPFIA3-209ENST00000602783 MYH16Q9H6N6 1097 aa27.06■■□□□ 1.92
PPFIA3-209ENST00000602783 USP17L3A6NCW0 530 aa27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 USP17L4A6NCW7 530 aa27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 IGHMBP2P38935 993 aaKnown RBP27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 CCT4P50991 539 aaKnown RBP27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 ZNF280AP59817 542 aaPredicted RBP27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 USP17L1Q7RTZ2 530 aa27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 LINS1Q8NG48 757 aa27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 PLA2G12BQ9BX93 195 aa27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 SPINK5Q9NQ38 1064 aaPredicted RBP27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 GGA3Q9NZ52 723 aa27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 ASTN2O75129 1339 aaPredicted RBP27.05■■□□□ 1.92
PPFIA3-209ENST00000602783 CASP7P55210 303 aa27.04■■□□□ 1.92
PPFIA3-209ENST00000602783 SULF1Q8IWU6 871 aa27.04■■□□□ 1.92
PPFIA3-209ENST00000602783 C2orf69Q8N8R5 385 aa27.04■■□□□ 1.92
PPFIA3-209ENST00000602783 GMLQ99445 158 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms