RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ARID5AQ03989 594 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 SAMD15Q9P1V8 674 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 KRT86O43790 486 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 DNAJC21Q5F1R6 531 aaKnown RBP10.91□□□□□ -0.66
CSMD1-217ENST00000602723 USP37Q86T82 979 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 FAM76AQ8TAV0 307 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 TMX3Q96JJ7 454 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 STIM2Q9P246 746 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 MAP3K2Q9Y2U5 619 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 ASIC1P78348 528 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 CFAP58Q5T655 872 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 NUDT16Q96DE0 195 aaKnown RBP10.9□□□□□ -0.66
CSMD1-217ENST00000602723 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 TRMT112Q9UI30 125 aaKnown RBP10.9□□□□□ -0.66
CSMD1-217ENST00000602723 TSPY2A6NKD2 308 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 BAG3O95817 575 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 ZKSCAN5Q9Y2L8 839 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 PSMA7O14818 248 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
CSMD1-217ENST00000602723 WTAPQ15007 396 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 HS1BP3Q53T59 392 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 NBPF11Q86T75 865 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC63Q8NA47 563 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 MRVI1Q9Y6F6 885 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 TTC16Q8NEE8 873 aa10.9□□□□□ -0.66
CSMD1-217ENST00000602723 KIF5AQ12840 1032 aa10.9□□□□□ -0.67
CSMD1-217ENST00000602723 GBP6Q6ZN66 633 aa10.9□□□□□ -0.67
CSMD1-217ENST00000602723 HDXQ7Z353 690 aa10.9□□□□□ -0.67
CSMD1-217ENST00000602723 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.67
CSMD1-217ENST00000602723 EEF2P13639 858 aaKnown RBP10.9□□□□□ -0.67
CSMD1-217ENST00000602723 KRT83P78385 493 aa10.9□□□□□ -0.67
CSMD1-217ENST00000602723 AEBP2Q6ZN18 517 aaPredicted RBP10.9□□□□□ -0.67
CSMD1-217ENST00000602723 TRMT1LQ7Z2T5 733 aaKnown RBP10.9□□□□□ -0.67
CSMD1-217ENST00000602723 HMGB2P26583 209 aaKnown RBP10.89□□□□□ -0.67
CSMD1-217ENST00000602723 RTN1Q16799 776 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 JAKMIP2Q96AA8 810 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 UBE3BQ7Z3V4 1068 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 TSGA10Q9BZW7 698 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 KRT23Q9C075 422 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 ZBTB43O43298 467 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 VAV2P52735 878 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 NECAB1Q8N987 351 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 CWC25Q9NXE8 425 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-217ENST00000602723 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-217ENST00000602723 MARCKSP29966 332 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-217ENST00000602723 LACTBP83111 547 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-217ENST00000602723 UBXN1Q04323 297 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 CCDC50Q8IVM0 306 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 TMEM87AQ8NBN3 555 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 NSD2O96028 1365 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 NBPF7P0C2Y1 421 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-217ENST00000602723 NAA25Q14CX7 972 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 NAIPQ13075 1403 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 SMIM23A6NLE4 172 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 IFT81Q8WYA0 676 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 GUCA1BQ9UMX6 200 aa10.89□□□□□ -0.67
CSMD1-217ENST00000602723 ASXL1Q8IXJ9 1541 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 KLF18A0A0U1RQI7 1052 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 PHACTR2O75167 634 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 RHOXF2BP0C7M4 288 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 SETDB1Q15047 1291 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 USHBP1Q8N6Y0 703 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 RHOXF2Q9BQY4 288 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 TTC21BQ7Z4L5 1316 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-217ENST00000602723 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 CPSF2Q9P2I0 782 aaKnown RBP10.88□□□□□ -0.67
CSMD1-217ENST00000602723 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-217ENST00000602723 B4GALNT4Q76KP1 1039 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 CCDC25Q86WR0 208 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 SDSP20132 328 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 SLC4A8Q2Y0W8 1093 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 CCDC42Q96M95 316 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 LRRC2Q9BYS8 371 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 LZTFL1Q9NQ48 299 aa10.88□□□□□ -0.67
CSMD1-217ENST00000602723 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 ZC3H6P61129 1189 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 SNRKQ9NRH2 765 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 CLGNO14967 610 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 WDHD1O75717 1129 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 GJC1P36383 396 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 PRIM1P49642 420 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 NEK11Q8NG66 645 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 BICDL2A1A5D9 508 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 ATP2A2P16615 1042 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 DNM1Q05193 864 aaKnown RBP10.87□□□□□ -0.67
CSMD1-217ENST00000602723 HEATR3Q7Z4Q2 680 aa10.87□□□□□ -0.67
CSMD1-217ENST00000602723 CRNKL1Q9BZJ0 848 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms