RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 RNF123Q5XPI4 1314 aa13.85□□□□□ -0.19
SHANK2-218ENST00000601538 MTHFSP49914 203 aa13.85□□□□□ -0.19
SHANK2-218ENST00000601538 BRD3Q15059 726 aa13.85□□□□□ -0.19
SHANK2-218ENST00000601538 SLC12A7Q9Y666 1083 aa13.85□□□□□ -0.19
SHANK2-218ENST00000601538 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 CUL5Q93034 780 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 THEGQ9P2T0 379 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 AFAP1L2Q8N4X5 818 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 DNAI1Q9UI46 699 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 EXOC1Q9NV70 894 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 CCDC194A0A1B0GVG4 234 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 PDCD2Q16342 344 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-218ENST00000601538 TAOK1Q7L7X3 1001 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 PRR16Q569H4 304 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 RNF10Q8N5U6 811 aaKnown RBP13.84□□□□□ -0.19
SHANK2-218ENST00000601538 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
SHANK2-218ENST00000601538 SNX16P57768 344 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 MIER3Q7Z3K6 550 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
SHANK2-218ENST00000601538 SELENOSQ9BQE4 189 aa13.83□□□□□ -0.19
SHANK2-218ENST00000601538 PANK2Q9BZ23 570 aa13.83□□□□□ -0.19
SHANK2-218ENST00000601538 CCDC63Q8NA47 563 aa13.83□□□□□ -0.19
SHANK2-218ENST00000601538 VEZTQ9HBM0 779 aa13.83□□□□□ -0.19
SHANK2-218ENST00000601538 MRPS9P82933 396 aaKnown RBP13.83□□□□□ -0.2
SHANK2-218ENST00000601538 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
SHANK2-218ENST00000601538 ERBINQ96RT1 1412 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 DTNBP1Q96EV8 351 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 GBP5Q96PP8 586 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 TTC36A6NLP5 189 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 CATIPQ7Z7H3 387 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
SHANK2-218ENST00000601538 CCDC26Q8TAB7 109 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 EXOC4Q96A65 974 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 UBA5Q9GZZ9 404 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 SYT1P21579 422 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 HVCN1Q96D96 273 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 NSD2O96028 1365 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 MCUR1Q96AQ8 359 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHANK2-218ENST00000601538 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 Q9H521 79 aa13.82□□□□□ -0.2
SHANK2-218ENST00000601538 KRT13P13646 458 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 VPS52Q8N1B4 723 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 FAN1Q9Y2M0 1017 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 LRP2BPQ9P2M1 347 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 DBN1Q16643 649 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 GSTA5Q7RTV2 222 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 GABPB2Q8TAK5 448 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-218ENST00000601538 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 PLCB1Q9NQ66 1216 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 LARSQ9P2J5 1176 aaKnown RBP13.81□□□□□ -0.2
SHANK2-218ENST00000601538 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 PCF11O94913 1555 aaKnown RBP13.81□□□□□ -0.2
SHANK2-218ENST00000601538 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-218ENST00000601538 SLFN5Q08AF3 891 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 SYNCQ9H7C4 482 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 SYKP43405 635 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 NAPBQ9H115 298 aa13.81□□□□□ -0.2
SHANK2-218ENST00000601538 UBA7P41226 1012 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-218ENST00000601538 JRKLQ9Y4A0 524 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 GAS8O95995 478 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 NCAPGQ9BPX3 1015 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 FERMT3Q86UX7 667 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 BICDL2A1A5D9 508 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 TCERG1LQ5VWI1 586 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 MMS22LQ6ZRQ5 1243 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 CNGA4Q8IV77 575 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 SYCP3Q8IZU3 236 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 CCDC65Q8IXS2 484 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 ERMNQ8TAM6 284 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
SHANK2-218ENST00000601538 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-218ENST00000601538 APLFQ8IW19 511 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-218ENST00000601538 CCDC170Q8IYT3 715 aa13.8□□□□□ -0.2
SHANK2-218ENST00000601538 CALCOCO2Q13137 446 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 CEP104O60308 925 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 GOLGA6CA6NDK9 693 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 GOLGA6DP0CG33 693 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 GOLGA6AQ9NYA3 693 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 USP5P45974 858 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 SATB1Q01826 763 aa13.79□□□□□ -0.2
SHANK2-218ENST00000601538 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
SHANK2-218ENST00000601538 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms