RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 NEUROD6Q96NK8 337 aa17.12■□□□□ 0.33
SMG9-211ENST00000601170 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 TTLL7Q6ZT98 887 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 BRF1Q92994 677 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
SMG9-211ENST00000601170 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
SMG9-211ENST00000601170 GOLIM4O00461 696 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 SLFNL1Q499Z3 407 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 CPDO75976 1380 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 SPATA31A3Q5VYP0 1347 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 DDX11Q96FC9 970 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
SMG9-211ENST00000601170 TIMM10P62072 90 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 FGD1P98174 961 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 TYRO3Q06418 890 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 SCRN1Q12765 414 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 RESTQ13127 1097 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMG9-211ENST00000601170 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
SMG9-211ENST00000601170 H3BQV1 296 aa17.08■□□□□ 0.33
SMG9-211ENST00000601170 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.33
SMG9-211ENST00000601170 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.33
SMG9-211ENST00000601170 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.33
SMG9-211ENST00000601170 IFFO2Q5TF58 517 aa17.08■□□□□ 0.33
SMG9-211ENST00000601170 GPR108Q9NPR9 543 aa17.08■□□□□ 0.33
SMG9-211ENST00000601170 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.33
SMG9-211ENST00000601170 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.33
SMG9-211ENST00000601170 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.32
SMG9-211ENST00000601170 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.32
SMG9-211ENST00000601170 A1BGP04217 495 aa17.08■□□□□ 0.32
SMG9-211ENST00000601170 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
SMG9-211ENST00000601170 CADPS2Q86UW7 1296 aa17.08■□□□□ 0.32
SMG9-211ENST00000601170 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
SMG9-211ENST00000601170 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
SMG9-211ENST00000601170 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
SMG9-211ENST00000601170 DHX32Q7L7V1 743 aaKnown RBP17.07■□□□□ 0.32
SMG9-211ENST00000601170 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
SMG9-211ENST00000601170 SMARCC2Q8TAQ2 1214 aa17.07■□□□□ 0.32
SMG9-211ENST00000601170 BICD2Q8TD16 824 aa17.07■□□□□ 0.32
SMG9-211ENST00000601170 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
SMG9-211ENST00000601170 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
SMG9-211ENST00000601170 PDCL3Q9H2J4 239 aa17.07■□□□□ 0.32
SMG9-211ENST00000601170 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 PFKFB2O60825 505 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 NR1I2O75469 434 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 ZMYM1Q5SVZ6 1142 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
SMG9-211ENST00000601170 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
SMG9-211ENST00000601170 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
SMG9-211ENST00000601170 EYA2O00167 538 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 SPC24Q8NBT2 197 aa17.06■□□□□ 0.32
SMG9-211ENST00000601170 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
SMG9-211ENST00000601170 LLPHQ9BRT6 129 aaKnown RBP17.06■□□□□ 0.32
SMG9-211ENST00000601170 PAPPAQ13219 1627 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
SMG9-211ENST00000601170 HSPD1P10809 573 aaKnown RBP17.05■□□□□ 0.32
SMG9-211ENST00000601170 APOBRQ0VD83 1088 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 MAST3O60307 1309 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
SMG9-211ENST00000601170 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 DYNC1I1O14576 645 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 KCNF1Q9H3M0 494 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 SPEF2Q9C093 1822 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 CBX8Q9HC52 389 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
SMG9-211ENST00000601170 PTPDC1A2A3K4 754 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 E7EWF7 191 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
SMG9-211ENST00000601170 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 PUS3Q9BZE2 481 aaKnown RBP17.03■□□□□ 0.32
SMG9-211ENST00000601170 GOLGA6L6A8MZA4 724 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
SMG9-211ENST00000601170 CIAO1O76071 339 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 TPM3P06753 285 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 FOSBP53539 338 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
SMG9-211ENST00000601170 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.32
SMG9-211ENST00000601170 HMGN5P82970 282 aaKnown RBP17.02■□□□□ 0.32
SMG9-211ENST00000601170 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.32
SMG9-211ENST00000601170 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms