RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 NEUROD2Q15784 382 aa21.89■■□□□ 1.09
USE1-208ENST00000600970 TBC1D16Q8TBP0 767 aa21.89■■□□□ 1.09
USE1-208ENST00000600970 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.09
USE1-208ENST00000600970 KIF4BQ2VIQ3 1234 aa21.88■■□□□ 1.09
USE1-208ENST00000600970 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
USE1-208ENST00000600970 HDGFL1Q5TGJ6 251 aa21.88■■□□□ 1.09
USE1-208ENST00000600970 TNRC18O15417 2968 aaPredicted RBP21.87■■□□□ 1.09
USE1-208ENST00000600970 VIL1P09327 827 aaKnown RBP21.87■■□□□ 1.09
USE1-208ENST00000600970 RNF186Q9NXI6 227 aa21.87■■□□□ 1.09
USE1-208ENST00000600970 DBF4Q9UBU7 674 aaPredicted RBP21.87■■□□□ 1.09
USE1-208ENST00000600970 IRS4O14654 1257 aaPredicted RBP21.86■■□□□ 1.09
USE1-208ENST00000600970 TRPA1O75762 1119 aa21.86■■□□□ 1.09
USE1-208ENST00000600970 RPS8P62241 208 aaKnown RBP21.86■■□□□ 1.09
USE1-208ENST00000600970 CCDC146Q8IYE0 955 aa21.86■■□□□ 1.09
USE1-208ENST00000600970 ZC3H12CQ9C0D7 883 aaKnown RBP21.86■■□□□ 1.09
USE1-208ENST00000600970 GGA3Q9NZ52 723 aa21.86■■□□□ 1.09
USE1-208ENST00000600970 TRIM35Q9UPQ4 493 aa21.86■■□□□ 1.09
USE1-208ENST00000600970 ASTN2O75129 1339 aaPredicted RBP21.85■■□□□ 1.09
USE1-208ENST00000600970 SLC10A3P09131 477 aa21.85■■□□□ 1.09
USE1-208ENST00000600970 HOXB7P09629 217 aa21.85■■□□□ 1.09
USE1-208ENST00000600970 SULF1Q8IWU6 871 aa21.85■■□□□ 1.09
USE1-208ENST00000600970 TRIM28Q13263 835 aaKnown RBP21.84■■□□□ 1.09
USE1-208ENST00000600970 CSRNP1Q96S65 589 aa21.84■■□□□ 1.09
USE1-208ENST00000600970 PODXL2Q9NZ53 605 aa21.84■■□□□ 1.09
USE1-208ENST00000600970 PSME4Q14997 1843 aa21.84■■□□□ 1.09
USE1-208ENST00000600970 RALBP1Q15311 655 aa21.83■■□□□ 1.09
USE1-208ENST00000600970 CDCA5Q96FF9 252 aa21.83■■□□□ 1.09
USE1-208ENST00000600970 SEC31BQ9NQW1 1179 aa21.83■■□□□ 1.09
USE1-208ENST00000600970 HYPKQ9NX55 129 aa21.83■■□□□ 1.09
USE1-208ENST00000600970 UFL1O94874 794 aa21.82■■□□□ 1.08
USE1-208ENST00000600970 ZNF609O15014 1411 aa21.81■■□□□ 1.08
USE1-208ENST00000600970 G3V3G9 751 aa21.81■■□□□ 1.08
USE1-208ENST00000600970 SOX10P56693 466 aa21.81■■□□□ 1.08
USE1-208ENST00000600970 ZNF280AP59817 542 aaPredicted RBP21.81■■□□□ 1.08
USE1-208ENST00000600970 DCAF8Q5TAQ9 597 aa21.81■■□□□ 1.08
USE1-208ENST00000600970 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
USE1-208ENST00000600970 GGA1Q9UJY5 639 aa21.81■■□□□ 1.08
USE1-208ENST00000600970 ANGEL2Q5VTE6 544 aaKnown RBP21.8■■□□□ 1.08
USE1-208ENST00000600970 RSBN1LQ6PCB5 846 aaPredicted RBP21.8■■□□□ 1.08
USE1-208ENST00000600970 RASAL3Q86YV0 1011 aa21.8■■□□□ 1.08
USE1-208ENST00000600970 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
USE1-208ENST00000600970 PCDH10Q9P2E7 1040 aa21.8■■□□□ 1.08
USE1-208ENST00000600970 ANKIB1Q9P2G1 1089 aa21.8■■□□□ 1.08
USE1-208ENST00000600970 SCARF1Q14162 830 aa21.79■■□□□ 1.08
USE1-208ENST00000600970 DUSP27Q5VZP5 1158 aa21.79■■□□□ 1.08
USE1-208ENST00000600970 AGBL3Q8NEM8 1001 aa21.79■■□□□ 1.08
USE1-208ENST00000600970 PAPPA2Q9BXP8 1791 aa21.79■■□□□ 1.08
USE1-208ENST00000600970 RIC3Q7Z5B4 369 aa21.78■■□□□ 1.08
USE1-208ENST00000600970 REM2Q8IYK8 340 aaPredicted RBP21.78■■□□□ 1.08
USE1-208ENST00000600970 CTU1Q7Z7A3 348 aaKnown RBP21.77■■□□□ 1.08
USE1-208ENST00000600970 GMLQ99445 158 aa21.77■■□□□ 1.08
USE1-208ENST00000600970 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
USE1-208ENST00000600970 HSP90B1P14625 803 aaKnown RBP21.76■■□□□ 1.07
USE1-208ENST00000600970 FKBP1BP68106 108 aa21.76■■□□□ 1.07
USE1-208ENST00000600970 CCDC152Q4G0S7 254 aa21.76■■□□□ 1.07
USE1-208ENST00000600970 PDE8AO60658 829 aa21.75■■□□□ 1.07
USE1-208ENST00000600970 GOLGA2Q08379 1002 aa21.75■■□□□ 1.07
USE1-208ENST00000600970 MYD88Q99836 296 aa21.75■■□□□ 1.07
USE1-208ENST00000600970 MYOZ2Q9NPC6 264 aa21.75■■□□□ 1.07
USE1-208ENST00000600970 MBIPQ9NS73 344 aa21.75■■□□□ 1.07
USE1-208ENST00000600970 MYBBP1AQ9BQG0 1328 aaKnown RBP21.75■■□□□ 1.07
USE1-208ENST00000600970 PITPNM2Q9BZ72 1349 aa21.75■■□□□ 1.07
USE1-208ENST00000600970 PCCAP05165 728 aaPredicted RBP21.74■■□□□ 1.07
USE1-208ENST00000600970 USP17L8P0C7I0 530 aa21.74■■□□□ 1.07
USE1-208ENST00000600970 CCDC191Q8NCU4 936 aa21.74■■□□□ 1.07
USE1-208ENST00000600970 JARID2Q92833 1246 aaPredicted RBP21.74■■□□□ 1.07
USE1-208ENST00000600970 CCDC85AQ96PX6 553 aaPredicted RBP21.74■■□□□ 1.07
USE1-208ENST00000600970 SCAF8Q9UPN6 1271 aaKnown RBP21.74■■□□□ 1.07
USE1-208ENST00000600970 WDR43Q15061 677 aaKnown RBP eCLIP21.73■■□□□ 1.07
USE1-208ENST00000600970 MOB2Q70IA6 237 aa21.73■■□□□ 1.07
USE1-208ENST00000600970 XDHP47989 1333 aa21.73■■□□□ 1.07
USE1-208ENST00000600970 ZNF646O15015 1829 aaPredicted RBP21.73■■□□□ 1.07
USE1-208ENST00000600970 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
USE1-208ENST00000600970 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
USE1-208ENST00000600970 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
USE1-208ENST00000600970 PODNQ7Z5L7 613 aa21.72■■□□□ 1.07
USE1-208ENST00000600970 ANKRD18AQ8IVF6 992 aa21.72■■□□□ 1.07
USE1-208ENST00000600970 ADAMTS8Q9UP79 889 aa21.72■■□□□ 1.07
USE1-208ENST00000600970 UBE2Q2LH0YL09 131 aa21.71■■□□□ 1.07
USE1-208ENST00000600970 ZNF853P0CG23 659 aa21.71■■□□□ 1.07
USE1-208ENST00000600970 ATP2B4P23634 1241 aa21.71■■□□□ 1.07
USE1-208ENST00000600970 CWC25Q9NXE8 425 aaPredicted RBP21.71■■□□□ 1.07
USE1-208ENST00000600970 HPS5Q9UPZ3 1129 aa21.71■■□□□ 1.07
USE1-208ENST00000600970 SPEF2Q9C093 1822 aa21.71■■□□□ 1.07
USE1-208ENST00000600970 PRAMEF18Q5VWM3 479 aa21.7■■□□□ 1.06
USE1-208ENST00000600970 WTIPA6NIX2 430 aaPredicted RBP21.69■■□□□ 1.06
USE1-208ENST00000600970 ELL2O00472 640 aaPredicted RBP21.69■■□□□ 1.06
USE1-208ENST00000600970 TBC1D8O95759 1140 aa21.69■■□□□ 1.06
USE1-208ENST00000600970 NBPF9Q3BBW0 867 aa21.69■■□□□ 1.06
USE1-208ENST00000600970 ZNF296Q8WUU4 475 aaPredicted RBP21.69■■□□□ 1.06
USE1-208ENST00000600970 PKN2Q16513 984 aaKnown RBP21.68■■□□□ 1.06
USE1-208ENST00000600970 METTL22Q9BUU2 404 aaPredicted RBP21.68■■□□□ 1.06
USE1-208ENST00000600970 HDAC9Q9UKV0 1011 aa21.68■■□□□ 1.06
USE1-208ENST00000600970 MYH3P11055 1940 aa21.68■■□□□ 1.06
USE1-208ENST00000600970 MED23Q9ULK4 1368 aa21.67■■□□□ 1.06
USE1-208ENST00000600970 TM4SF4P48230 202 aa21.66■■□□□ 1.06
USE1-208ENST00000600970 PRPF38BQ5VTL8 546 aaKnown RBP21.66■■□□□ 1.06
USE1-208ENST00000600970 CDC5LQ99459 802 aaKnown RBP21.66■■□□□ 1.06
USE1-208ENST00000600970 MXD3Q9BW11 206 aa21.66■■□□□ 1.06
USE1-208ENST00000600970 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms