RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
CHMP2A-207ENST00000600804 CRY2Q49AN0 593 aa14.61□□□□□ -0.07
CHMP2A-207ENST00000600804 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
CHMP2A-207ENST00000600804 MEIS3Q99687 375 aa14.61□□□□□ -0.07
CHMP2A-207ENST00000600804 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
CHMP2A-207ENST00000600804 TNRC18O15417 2968 aaPredicted RBP14.61□□□□□ -0.07
CHMP2A-207ENST00000600804 CASP8AP2Q9UKL3 1982 aa14.6□□□□□ -0.07
CHMP2A-207ENST00000600804 UBTFL1P0CB47 393 aaPredicted RBP14.6□□□□□ -0.07
CHMP2A-207ENST00000600804 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
CHMP2A-207ENST00000600804 FAM89AQ96GI7 184 aa14.6□□□□□ -0.07
CHMP2A-207ENST00000600804 CRBNQ96SW2 442 aa14.6□□□□□ -0.07
CHMP2A-207ENST00000600804 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 GNAI2P04899 355 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 HSPA8P11142 646 aaKnown RBP14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 LBX1P52954 281 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 RABL6Q3YEC7 729 aaPredicted RBP14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 ERICH6BQ5W0A0 696 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 C3orf67Q6ZVT6 689 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 CNTROBQ8N137 903 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 PSMD1Q99460 953 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
CHMP2A-207ENST00000600804 LRRC37AA6NMS7 1700 aa14.58□□□□□ -0.07
CHMP2A-207ENST00000600804 PDE8AO60658 829 aa14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 CTCFP49711 727 aaPredicted RBP14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 SCNN1DP51172 638 aa14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 MTX1Q13505 466 aa14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 GPC2Q8N158 579 aa14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 KAZALD1Q96I82 304 aa14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 RTL9Q8NET4 1388 aa14.58□□□□□ -0.08
CHMP2A-207ENST00000600804 CSF1RP07333 972 aa14.57□□□□□ -0.08
CHMP2A-207ENST00000600804 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
CHMP2A-207ENST00000600804 ALDH1B1P30837 517 aa14.57□□□□□ -0.08
CHMP2A-207ENST00000600804 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
CHMP2A-207ENST00000600804 SUCLG2Q96I99 432 aa14.57□□□□□ -0.08
CHMP2A-207ENST00000600804 COL4A1P02462 1669 aa14.57□□□□□ -0.08
CHMP2A-207ENST00000600804 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 NEFLP07196 543 aa14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 HOXA10P31260 410 aaPredicted RBP14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 EPS15P42566 896 aa14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 FOXO4P98177 505 aa14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 DEFB115Q30KQ5 88 aa14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 NLRP3Q96P20 1036 aa14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 WDR33Q9C0J8 1336 aaKnown RBP14.56□□□□□ -0.08
CHMP2A-207ENST00000600804 CTSWP56202 376 aa14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 PNMA8AQ86V59 439 aaPredicted RBP14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 EXOC6Q8TAG9 804 aa14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
CHMP2A-207ENST00000600804 TRAF5O00463 557 aa14.54□□□□□ -0.08
CHMP2A-207ENST00000600804 HCLS1P14317 486 aaPredicted RBP14.54□□□□□ -0.08
CHMP2A-207ENST00000600804 EPHA10Q5JZY3 1008 aa14.54□□□□□ -0.08
CHMP2A-207ENST00000600804 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
CHMP2A-207ENST00000600804 AIDAQ96BJ3 306 aa14.54□□□□□ -0.08
CHMP2A-207ENST00000600804 BICC1Q9H694 974 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-207ENST00000600804 CCDC152Q4G0S7 254 aa14.53□□□□□ -0.08
CHMP2A-207ENST00000600804 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
CHMP2A-207ENST00000600804 CST9Q5W186 159 aa14.53□□□□□ -0.08
CHMP2A-207ENST00000600804 JARID2Q92833 1246 aaPredicted RBP14.53□□□□□ -0.08
CHMP2A-207ENST00000600804 EIF6P56537 245 aaKnown RBP14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 ATP8B2P98198 1209 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 CEP85Q6P2H3 762 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 JDP2Q8WYK2 163 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 ABHD8Q96I13 439 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 ABT1Q9ULW3 272 aaKnown RBP14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 SCN9AQ15858 1988 aa14.52□□□□□ -0.09
CHMP2A-207ENST00000600804 PPEF1O14829 653 aaPredicted RBP14.51□□□□□ -0.09
CHMP2A-207ENST00000600804 CC2D2BQ6DHV5 1058 aa14.51□□□□□ -0.09
CHMP2A-207ENST00000600804 LARGE2Q8N3Y3 721 aa14.51□□□□□ -0.09
CHMP2A-207ENST00000600804 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
CHMP2A-207ENST00000600804 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
CHMP2A-207ENST00000600804 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 POLA2Q14181 598 aa14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 RPGRQ92834 1020 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 CAPNS2Q96L46 248 aa14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 C1orf115Q9H7X2 142 aa14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 PSME4Q14997 1843 aa14.5□□□□□ -0.09
CHMP2A-207ENST00000600804 AOC2O75106 756 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 HMMRO75330 724 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 IFIT5Q13325 482 aaKnown RBP14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 HDAC1Q13547 482 aaPredicted RBP14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 AOC3Q16853 763 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 SIRT2Q8IXJ6 389 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 GREM2Q9H772 168 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 TSKSQ9UJT2 592 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 PCDHB15Q9Y5E8 787 aa14.49□□□□□ -0.09
CHMP2A-207ENST00000600804 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 ANKRD18BA2A2Z9 1011 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 SRGAP3O43295 1099 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 ITGA6P23229 1130 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 LMOD1P29536 600 aaPredicted RBP14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 CCDC57Q2TAC2 916 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms