RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	RFX5	P48382	616 aa	Predicted RBP	27.35	■■□□□ 1.97
LTBP4-227	ENST00000600026	MPHOSPH8	Q99549	860 aa		27.35	■■□□□ 1.97
LTBP4-227	ENST00000600026	BSDC1	Q9NW68	430 aa	Predicted RBP	27.35	■■□□□ 1.97
LTBP4-227	ENST00000600026	CHD4	Q14839	1912 aa		27.35	■■□□□ 1.97
LTBP4-227	ENST00000600026	RASSF7	Q02833	373 aa		27.34	■■□□□ 1.97
LTBP4-227	ENST00000600026	SRGAP3	O43295	1099 aa		27.33	■■□□□ 1.97
LTBP4-227	ENST00000600026	RTKN2	Q8IZC4	609 aa		27.33	■■□□□ 1.97
LTBP4-227	ENST00000600026	KLHDC4	Q8TBB5	520 aa		27.33	■■□□□ 1.97
LTBP4-227	ENST00000600026	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.32	■■□□□ 1.96
LTBP4-227	ENST00000600026	TAOK3	Q9H2K8	898 aa		27.32	■■□□□ 1.96
LTBP4-227	ENST00000600026	PNMA6E	A0A0J9YXQ4	647 aa		27.31	■■□□□ 1.96
LTBP4-227	ENST00000600026	GPSM2	P81274	684 aa		27.31	■■□□□ 1.96
LTBP4-227	ENST00000600026	GRIPAP1	Q4V328	841 aa		27.31	■■□□□ 1.96
LTBP4-227	ENST00000600026	MINPP1	Q9UNW1	487 aa		27.31	■■□□□ 1.96
LTBP4-227	ENST00000600026	LTBP3	Q9NS15	1303 aa		27.31	■■□□□ 1.96
LTBP4-227	ENST00000600026	DICER1	Q9UPY3	1922 aa	Known RBP	27.31	■■□□□ 1.96
LTBP4-227	ENST00000600026	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.3	■■□□□ 1.96
LTBP4-227	ENST00000600026	PTPN12	Q05209	780 aa	Known RBP	27.3	■■□□□ 1.96
LTBP4-227	ENST00000600026	CEP85	Q6P2H3	762 aa		27.3	■■□□□ 1.96
LTBP4-227	ENST00000600026	LDHAL6A	Q6ZMR3	332 aa		27.3	■■□□□ 1.96
LTBP4-227	ENST00000600026	MPND	Q8N594	471 aa		27.3	■■□□□ 1.96
LTBP4-227	ENST00000600026	GTF3C3	Q9Y5Q9	886 aa		27.3	■■□□□ 1.96
LTBP4-227	ENST00000600026	ATP8B2	P98198	1209 aa		27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	DPP8	Q6V1X1	898 aa	Predicted RBP	27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	PSMD1	Q99460	953 aa		27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	PUS3	Q9BZE2	481 aa	Known RBP	27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	CNNM1	Q9NRU3	951 aa		27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	PPP4R2	Q9NY27	417 aa		27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	PCDHB15	Q9Y5E8	787 aa		27.29	■■□□□ 1.96
LTBP4-227	ENST00000600026	TIAM2	Q8IVF5	1701 aa		27.28	■■□□□ 1.96
LTBP4-227	ENST00000600026	HMMR	O75330	724 aa		27.28	■■□□□ 1.96
LTBP4-227	ENST00000600026	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.28	■■□□□ 1.96
LTBP4-227	ENST00000600026	PRELP	P51888	382 aa		27.27	■■□□□ 1.96
LTBP4-227	ENST00000600026	CHRND	Q07001	517 aa		27.27	■■□□□ 1.96
LTBP4-227	ENST00000600026	PODXL2	Q9NZ53	605 aa		27.27	■■□□□ 1.96
LTBP4-227	ENST00000600026	PA2G4	Q9UQ80	394 aa	Known RBP	27.27	■■□□□ 1.96
LTBP4-227	ENST00000600026	XDH	P47989	1333 aa		27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	POLA2	Q14181	598 aa		27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	LRRC24	Q50LG9	513 aa		27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	SSH3	Q8TE77	659 aa		27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	COPRS	Q9NQ92	184 aa		27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	ANKIB1	Q9P2G1	1089 aa		27.26	■■□□□ 1.95
LTBP4-227	ENST00000600026	RWDD1	Q9H446	243 aa	Predicted RBP	27.25	■■□□□ 1.95
LTBP4-227	ENST00000600026	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.25	■■□□□ 1.95
LTBP4-227	ENST00000600026	EYA2	O00167	538 aa		27.24	■■□□□ 1.95
LTBP4-227	ENST00000600026	SUPT20H	Q8NEM7	779 aa		27.24	■■□□□ 1.95
LTBP4-227	ENST00000600026	ANKRD2	Q9GZV1	360 aa		27.24	■■□□□ 1.95
LTBP4-227	ENST00000600026	SIL1	Q9H173	461 aa		27.24	■■□□□ 1.95
LTBP4-227	ENST00000600026	RIPOR2	Q9Y4F9	1068 aa		27.24	■■□□□ 1.95
LTBP4-227	ENST00000600026	UFL1	O94874	794 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	TBC1D16	Q8TBP0	767 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	CCDC136	Q96JN2	1154 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	POLL	Q9UGP5	575 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	GGA1	Q9UJY5	639 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	FBXO3	Q9UK99	471 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	CEP350	Q5VT06	3117 aa		27.23	■■□□□ 1.95
LTBP4-227	ENST00000600026	CIAO1	O76071	339 aa		27.22	■■□□□ 1.95
LTBP4-227	ENST00000600026	LMNB1	P20700	586 aa		27.22	■■□□□ 1.95
LTBP4-227	ENST00000600026	ATP2B4	P23634	1241 aa		27.22	■■□□□ 1.95
LTBP4-227	ENST00000600026	IARS	P41252	1262 aa	Known RBP	27.22	■■□□□ 1.95
LTBP4-227	ENST00000600026	HELB	Q8NG08	1087 aa	Predicted RBP	27.22	■■□□□ 1.95
LTBP4-227	ENST00000600026	MROH5	Q6ZUA9	1318 aa		27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	COL4A5	P29400	1685 aa		27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	C6orf229	H3BNL8	230 aa		27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	TAF5L	O75529	589 aa		27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	HDAC1	Q13547	482 aa	Predicted RBP	27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	ATG9A	Q7Z3C6	839 aa		27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	SIRT2	Q8IXJ6	389 aa		27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	GPR101	Q96P66	508 aa	Predicted RBP	27.21	■■□□□ 1.95
LTBP4-227	ENST00000600026	METTL24	Q5JXM2	366 aa		27.2	■■□□□ 1.94
LTBP4-227	ENST00000600026	C9orf131	Q5VYM1	1079 aa		27.2	■■□□□ 1.94
LTBP4-227	ENST00000600026	RNF181	Q9P0P0	153 aa		27.2	■■□□□ 1.94
LTBP4-227	ENST00000600026	WTIP	A6NIX2	430 aa	Predicted RBP	27.19	■■□□□ 1.94
LTBP4-227	ENST00000600026	LEMD3	Q9Y2U8	911 aa		27.19	■■□□□ 1.94
LTBP4-227	ENST00000600026	PPIP5K2	O43314	1243 aa		27.18	■■□□□ 1.94
LTBP4-227	ENST00000600026	IL15	P40933	162 aa	Predicted RBP	27.18	■■□□□ 1.94
LTBP4-227	ENST00000600026	AOC3	Q16853	763 aa		27.18	■■□□□ 1.94
LTBP4-227	ENST00000600026	VGLL2	Q8N8G2	317 aa		27.18	■■□□□ 1.94
LTBP4-227	ENST00000600026	EYA3	Q99504	573 aa		27.18	■■□□□ 1.94
LTBP4-227	ENST00000600026	ZNF804B	A4D1E1	1349 aa		27.17	■■□□□ 1.94
LTBP4-227	ENST00000600026	SNAP23	O00161	211 aa		27.17	■■□□□ 1.94
LTBP4-227	ENST00000600026	KIAA2012	Q0VF49	1180 aa		27.17	■■□□□ 1.94
LTBP4-227	ENST00000600026	KCNJ4	P48050	445 aa		27.16	■■□□□ 1.94
LTBP4-227	ENST00000600026	LARGE2	Q8N3Y3	721 aa		27.16	■■□□□ 1.94
LTBP4-227	ENST00000600026	VPS33B	Q9H267	617 aa		27.16	■■□□□ 1.94
LTBP4-227	ENST00000600026	MED23	Q9ULK4	1368 aa		27.16	■■□□□ 1.94
LTBP4-227	ENST00000600026	ARAP2	Q8WZ64	1704 aa		27.16	■■□□□ 1.94
LTBP4-227	ENST00000600026	RIMBP2	O15034	1052 aa		27.15	■■□□□ 1.94
LTBP4-227	ENST00000600026	SURF6	O75683	361 aa	Known RBP	27.15	■■□□□ 1.94
LTBP4-227	ENST00000600026	PDE8B	O95263	885 aa		27.15	■■□□□ 1.94
LTBP4-227	ENST00000600026	WASHC4	Q2M389	1173 aa		27.15	■■□□□ 1.94
LTBP4-227	ENST00000600026	NOP58	Q9Y2X3	529 aa	Known RBP	27.15	■■□□□ 1.94
LTBP4-227	ENST00000600026	IGHD	P01880	384 aa		27.14	■■□□□ 1.94
LTBP4-227	ENST00000600026	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.14	■■□□□ 1.94
LTBP4-227	ENST00000600026	B4GALNT3	Q6L9W6	998 aa		27.14	■■□□□ 1.94
LTBP4-227	ENST00000600026	KLRK1	P26718	216 aa		27.13	■■□□□ 1.93
LTBP4-227	ENST00000600026	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.13	■■□□□ 1.93
LTBP4-227	ENST00000600026	IRS2	Q9Y4H2	1338 aa		27.13	■■□□□ 1.93
LTBP4-227	ENST00000600026	UBE4A	Q14139	1066 aa		27.12	■■□□□ 1.93

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