RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TBC1D16Q8TBP0 767 aa17.74■□□□□ 0.43
IRF3-225ENST00000600022 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
IRF3-225ENST00000600022 BEGAINQ9BUH8 593 aa17.74■□□□□ 0.43
IRF3-225ENST00000600022 HYPKQ9NX55 129 aa17.74■□□□□ 0.43
IRF3-225ENST00000600022 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 LRRC37AA6NMS7 1700 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 ADM5C9JUS6 153 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 ECE2O60344 883 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
IRF3-225ENST00000600022 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 DPF2Q92785 391 aa17.73■□□□□ 0.43
IRF3-225ENST00000600022 CCDC85CA6NKD9 419 aa17.72■□□□□ 0.43
IRF3-225ENST00000600022 APAF1O14727 1248 aa17.72■□□□□ 0.43
IRF3-225ENST00000600022 HOXB7P09629 217 aa17.72■□□□□ 0.43
IRF3-225ENST00000600022 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
IRF3-225ENST00000600022 MYD88Q99836 296 aa17.72■□□□□ 0.43
IRF3-225ENST00000600022 HUNKP57058 714 aa17.71■□□□□ 0.43
IRF3-225ENST00000600022 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
IRF3-225ENST00000600022 HHIPL1Q96JK4 782 aa17.71■□□□□ 0.43
IRF3-225ENST00000600022 POLR2AP24928 1970 aaKnown RBP17.7■□□□□ 0.42
IRF3-225ENST00000600022 KRT26Q7Z3Y9 468 aa17.7■□□□□ 0.42
IRF3-225ENST00000600022 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
IRF3-225ENST00000600022 FAM155AB1AL88 458 aaPredicted RBP17.69■□□□□ 0.42
IRF3-225ENST00000600022 BRPF1P55201 1214 aaPredicted RBP17.69■□□□□ 0.42
IRF3-225ENST00000600022 SCAF8Q9UPN6 1271 aaKnown RBP17.69■□□□□ 0.42
IRF3-225ENST00000600022 CASP8AP2Q9UKL3 1982 aa17.69■□□□□ 0.42
IRF3-225ENST00000600022 SCN9AQ15858 1988 aa17.68■□□□□ 0.42
IRF3-225ENST00000600022 VIL1P09327 827 aaKnown RBP17.68■□□□□ 0.42
IRF3-225ENST00000600022 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
IRF3-225ENST00000600022 ZC3H12CQ9C0D7 883 aaKnown RBP17.68■□□□□ 0.42
IRF3-225ENST00000600022 MCOLN1Q9GZU1 580 aa17.68■□□□□ 0.42
IRF3-225ENST00000600022 UFL1O94874 794 aa17.67■□□□□ 0.42
IRF3-225ENST00000600022 PODXL2Q9NZ53 605 aa17.67■□□□□ 0.42
IRF3-225ENST00000600022 ANKIB1Q9P2G1 1089 aa17.67■□□□□ 0.42
IRF3-225ENST00000600022 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
IRF3-225ENST00000600022 KIF4BQ2VIQ3 1234 aa17.66■□□□□ 0.42
IRF3-225ENST00000600022 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
IRF3-225ENST00000600022 DCPSQ96C86 337 aaKnown RBP17.66■□□□□ 0.42
IRF3-225ENST00000600022 EYA3Q99504 573 aa17.66■□□□□ 0.42
IRF3-225ENST00000600022 GBA2Q9HCG7 927 aaPredicted RBP17.66■□□□□ 0.42
IRF3-225ENST00000600022 IFT57Q9NWB7 429 aa17.66■□□□□ 0.42
IRF3-225ENST00000600022 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
IRF3-225ENST00000600022 RPS12P25398 132 aaKnown RBP17.65■□□□□ 0.42
IRF3-225ENST00000600022 KIF23Q02241 960 aaPredicted RBP17.65■□□□□ 0.42
IRF3-225ENST00000600022 RGMBQ6NW40 437 aa17.65■□□□□ 0.42
IRF3-225ENST00000600022 GGA3Q9NZ52 723 aa17.65■□□□□ 0.42
IRF3-225ENST00000600022 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
IRF3-225ENST00000600022 PDE8AO60658 829 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 IGKV5-2P06315 115 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 GNAI1P63096 354 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 NOGQ13253 232 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 SCARF1Q14162 830 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 CCDC191Q8NCU4 936 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 METTL22Q9BUU2 404 aaPredicted RBP17.64■□□□□ 0.41
IRF3-225ENST00000600022 MXD3Q9BW11 206 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 CWC25Q9NXE8 425 aaPredicted RBP17.64■□□□□ 0.41
IRF3-225ENST00000600022 MAP3K2Q9Y2U5 619 aa17.64■□□□□ 0.41
IRF3-225ENST00000600022 TNRC18O15417 2968 aaPredicted RBP17.64■□□□□ 0.41
IRF3-225ENST00000600022 ZNF157P51786 506 aaPredicted RBP17.63■□□□□ 0.41
IRF3-225ENST00000600022 DGKZQ13574 1117 aa17.63■□□□□ 0.41
IRF3-225ENST00000600022 ANGEL2Q5VTE6 544 aaKnown RBP17.63■□□□□ 0.41
IRF3-225ENST00000600022 RSBN1LQ6PCB5 846 aaPredicted RBP17.63■□□□□ 0.41
IRF3-225ENST00000600022 C2orf69Q8N8R5 385 aa17.63■□□□□ 0.41
IRF3-225ENST00000600022 GMLQ99445 158 aa17.63■□□□□ 0.41
IRF3-225ENST00000600022 G3V3G9 751 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 CA12O43570 354 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 RGS19P49795 217 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 ZNF280AP59817 542 aaPredicted RBP17.62■□□□□ 0.41
IRF3-225ENST00000600022 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 MOB2Q70IA6 237 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 G2E3Q7L622 706 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 TSR2Q969E8 191 aaKnown RBP17.62■□□□□ 0.41
IRF3-225ENST00000600022 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
IRF3-225ENST00000600022 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
IRF3-225ENST00000600022 TRPA1O75762 1119 aa17.61■□□□□ 0.41
IRF3-225ENST00000600022 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
IRF3-225ENST00000600022 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
IRF3-225ENST00000600022 RNF186Q9NXI6 227 aa17.61■□□□□ 0.41
IRF3-225ENST00000600022 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.412e-8■□□□□ 8.3
IRF3-225ENST00000600022 MLLT1Q03111 559 aaPredicted RBP17.6■□□□□ 0.41
IRF3-225ENST00000600022 CWF19L2Q2TBE0 894 aaKnown RBP17.6■□□□□ 0.41
IRF3-225ENST00000600022 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
IRF3-225ENST00000600022 ANKRD18AQ8IVF6 992 aa17.6■□□□□ 0.41
IRF3-225ENST00000600022 SULF1Q8IWU6 871 aa17.6■□□□□ 0.41
IRF3-225ENST00000600022 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
IRF3-225ENST00000600022 GREM2Q9H772 168 aa17.6■□□□□ 0.41
IRF3-225ENST00000600022 NBPF9Q3BBW0 867 aa17.59■□□□□ 0.41
IRF3-225ENST00000600022 CCDC102AQ96A19 550 aa17.59■□□□□ 0.41
IRF3-225ENST00000600022 MYOZ2Q9NPC6 264 aa17.59■□□□□ 0.41
IRF3-225ENST00000600022 MINPP1Q9UNW1 487 aa17.59■□□□□ 0.41
IRF3-225ENST00000600022 XDHP47989 1333 aa17.58■□□□□ 0.4
IRF3-225ENST00000600022 SLC10A3P09131 477 aa17.58■□□□□ 0.4
IRF3-225ENST00000600022 USP17L8P0C7I0 530 aa17.58■□□□□ 0.4
IRF3-225ENST00000600022 CTSWP56202 376 aa17.58■□□□□ 0.4
IRF3-225ENST00000600022 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
IRF3-225ENST00000600022 KSR2Q6VAB6 950 aa17.58■□□□□ 0.4
IRF3-225ENST00000600022 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms