RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 UFL1O94874 794 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 POTEIP0CG38 1075 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 ITGA6P23229 1130 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 EPHX2P34913 555 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 APLP1P51693 650 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 HNRNPUQ00839 825 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 CXCL9Q07325 125 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 EPHA10Q5JZY3 1008 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 LDHDQ86WU2 507 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 GPR101Q96P66 508 aaPredicted RBP10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 GGA1Q9UJY5 639 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 GJA3Q9Y6H8 435 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
CHMP2A-205ENST00000600006 ATP2B4P23634 1241 aa10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 LMOD1P29536 600 aaPredicted RBP10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 IGHMBP2P38935 993 aaKnown RBP10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 CIAPIN1Q6FI81 312 aa10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 C9orf78Q9NZ63 289 aaPredicted RBP10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 ANKIB1Q9P2G1 1089 aa10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 MINPP1Q9UNW1 487 aa10.09□□□□□ -0.79
CHMP2A-205ENST00000600006 ZBED9Q6R2W3 1325 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 KIF16BQ96L93 1317 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 ANKRD18BA2A2Z9 1011 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 ECE2O60344 883 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 RAD17O75943 681 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 NBPF7P0C2Y1 421 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 RARSP54136 660 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 TNIP1Q15025 636 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 LMBR1LQ6UX01 489 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 PNMA8AQ86V59 439 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 KAZALD1Q96I82 304 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 SUCLG2Q96I99 432 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 ZC3H12CQ9C0D7 883 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 DBNDD1Q9H9R9 158 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 GPRC5DQ9NZD1 345 aa10.08□□□□□ -0.8
CHMP2A-205ENST00000600006 EPS15P42566 896 aa10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 GMPSP49915 693 aaPredicted RBP10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 CCT4P50991 539 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 RABL6Q3YEC7 729 aaPredicted RBP10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 EAPPQ56P03 285 aaPredicted RBP10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 ANKRD2Q9GZV1 360 aa10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 LEMD3Q9Y2U8 911 aa10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 PASKQ96RG2 1323 aa10.07□□□□□ -0.8
CHMP2A-205ENST00000600006 TRPM7Q96QT4 1865 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 PSMD14O00487 310 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 CCDC57Q2TAC2 916 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 USP50Q70EL3 339 aaPredicted RBP10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 USP44Q9H0E7 712 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 ADARB2Q9NS39 739 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 NOB1Q9ULX3 412 aaKnown RBP10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 ZNF804BA4D1E1 1349 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 IRS2Q9Y4H2 1338 aa10.06□□□□□ -0.8
CHMP2A-205ENST00000600006 ARAP2Q8WZ64 1704 aa10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 WTIPA6NIX2 430 aaPredicted RBP10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 RPS12P25398 132 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 CHRNDQ07001 517 aa10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 ARHGAP45Q92619 1136 aa10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 DPF2Q92785 391 aa10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 BICC1Q9H694 974 aaKnown RBP10.05□□□□□ -0.8
CHMP2A-205ENST00000600006 G3V3G9 751 aa10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 VIL1P09327 827 aaKnown RBP10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 PODNQ7Z5L7 613 aa10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 ZNF594Q96JF6 807 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 KCNQ5Q9NR82 932 aa10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
CHMP2A-205ENST00000600006 SHTN1A0MZ66 631 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 KLRK1P26718 216 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 HTRA3P83110 453 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 MAP1SQ66K74 1059 aaPredicted RBP10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 LDHAL6AQ6ZMR3 332 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 C15orf52Q6ZUT6 534 aaKnown RBP10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 TXNRD3Q86VQ6 643 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 TRPM4Q8TD43 1214 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 COA1Q9GZY4 146 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 CNNM1Q9NRU3 951 aa10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 CNOT7Q9UIV1 285 aaKnown RBP10.03□□□□□ -0.8
CHMP2A-205ENST00000600006 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 H7C1D1 291 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 BCAR3O75815 825 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 KCNJ4P48050 445 aa10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 HIRAP54198 1017 aaPredicted RBP10.02□□□□□ -0.81
CHMP2A-205ENST00000600006 INTS3Q68E01 1043 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms