RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 CYP21A2P08686 494 aa12.75□□□□□ -0.37
ZNF544-215ENST00000599953 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
ZNF544-215ENST00000599953 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
ZNF544-215ENST00000599953 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
ZNF544-215ENST00000599953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF544-215ENST00000599953 UBR2Q8IWV8 1755 aa12.75□□□□□ -0.37
ZNF544-215ENST00000599953 TPM3P06753 285 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 HSP90AA2PQ14568 343 aaPredicted RBP12.74□□□□□ -0.37
ZNF544-215ENST00000599953 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 EYA2O00167 538 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 GOLIM4O00461 696 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
ZNF544-215ENST00000599953 TTLL7Q6ZT98 887 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 DHX32Q7L7V1 743 aaKnown RBP12.74□□□□□ -0.37
ZNF544-215ENST00000599953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF544-215ENST00000599953 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
ZNF544-215ENST00000599953 GOLGA6L6A8MZA4 724 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 HMGN5P82970 282 aaKnown RBP12.73□□□□□ -0.37
ZNF544-215ENST00000599953 COL9A3Q14050 684 aaPredicted RBP12.73□□□□□ -0.37
ZNF544-215ENST00000599953 SEC62Q99442 399 aaKnown RBP12.73□□□□□ -0.37
ZNF544-215ENST00000599953 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 SPEF2Q9C093 1822 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 IFIT1P09914 478 aaKnown RBP12.73□□□□□ -0.37
ZNF544-215ENST00000599953 IL2RBP14784 551 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 ZMYM1Q5SVZ6 1142 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 FAM200AQ8TCP9 573 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 LEO1Q8WVC0 666 aaPredicted RBP12.73□□□□□ -0.37
ZNF544-215ENST00000599953 BRF1Q92994 677 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 KCPQ6ZWJ8 1503 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
ZNF544-215ENST00000599953 PFKFB2O60825 505 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 DTNBO60941 627 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 TJP1Q07157 1748 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 CEP126Q9P2H0 1117 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 AKAP2Q9Y2D5 859 aa12.72□□□□□ -0.37
ZNF544-215ENST00000599953 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.37
ZNF544-215ENST00000599953 JAK2O60674 1132 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 A1BGP04217 495 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 LIG1P18858 919 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 TIMM10P62072 90 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 RESTQ13127 1097 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 CCDC57Q2TAC2 916 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 NAA16Q6N069 864 aaPredicted RBP12.71□□□□□ -0.37
ZNF544-215ENST00000599953 FAM173BQ6P4H8 233 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 SASS6Q6UVJ0 657 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 BICD2Q8TD16 824 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 DACT1Q9NYF0 836 aa12.71□□□□□ -0.37
ZNF544-215ENST00000599953 CCDC9Q9Y3X0 531 aaKnown RBP12.71□□□□□ -0.37
ZNF544-215ENST00000599953 COL5A2P05997 1499 aaPredicted RBP12.71□□□□□ -0.38
ZNF544-215ENST00000599953 TNS2Q63HR2 1409 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 TYRO3Q06418 890 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 SCRN1Q12765 414 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 ATL3Q6DD88 541 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 BRINP3Q76B58 766 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 CLSTN2Q9H4D0 955 aa12.71□□□□□ -0.38
ZNF544-215ENST00000599953 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.38
ZNF544-215ENST00000599953 CAVIN2O95810 425 aa12.7□□□□□ -0.38
ZNF544-215ENST00000599953 ZFYP08048 801 aaPredicted RBP12.7□□□□□ -0.38
ZNF544-215ENST00000599953 HSPD1P10809 573 aaKnown RBP12.7□□□□□ -0.38
ZNF544-215ENST00000599953 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
ZNF544-215ENST00000599953 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
ZNF544-215ENST00000599953 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
ZNF544-215ENST00000599953 LRRC24Q50LG9 513 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 DNTTIP2Q5QJE6 756 aaKnown RBP12.69□□□□□ -0.38
ZNF544-215ENST00000599953 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 RBM43Q6ZSC3 357 aaKnown RBP12.69□□□□□ -0.38
ZNF544-215ENST00000599953 STOX1Q6ZVD7 989 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 MAST3O60307 1309 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 E7EWF7 191 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 CHGBP05060 677 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 UQCRHP07919 91 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
ZNF544-215ENST00000599953 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 CAMK4Q16566 473 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 KIF6Q6ZMV9 814 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 NSUN7Q8NE18 718 aaKnown RBP12.69□□□□□ -0.38
ZNF544-215ENST00000599953 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 ZNF274Q96GC6 653 aaPredicted RBP12.69□□□□□ -0.38
ZNF544-215ENST00000599953 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
ZNF544-215ENST00000599953 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
ZNF544-215ENST00000599953 ZNF594Q96JF6 807 aaPredicted RBP12.68□□□□□ -0.38
ZNF544-215ENST00000599953 ZNF396Q96N95 335 aaPredicted RBP12.68□□□□□ -0.38
ZNF544-215ENST00000599953 LRRC2Q9BYS8 371 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms