RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
IRF3-224ENST00000599680 GMPSP49915 693 aaPredicted RBP18.19■□□□□ 0.5
IRF3-224ENST00000599680 SLC4A10Q6U841 1118 aa18.19■□□□□ 0.5
IRF3-224ENST00000599680 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
IRF3-224ENST00000599680 KLRG1Q96E93 195 aa18.19■□□□□ 0.5
IRF3-224ENST00000599680 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
IRF3-224ENST00000599680 ECE2O60344 883 aa18.18■□□□□ 0.5
IRF3-224ENST00000599680 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
IRF3-224ENST00000599680 USP50Q70EL3 339 aaPredicted RBP18.18■□□□□ 0.5
IRF3-224ENST00000599680 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
IRF3-224ENST00000599680 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
IRF3-224ENST00000599680 GPRC5DQ9NZD1 345 aa18.18■□□□□ 0.5
IRF3-224ENST00000599680 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
IRF3-224ENST00000599680 DOK7Q18PE1 504 aa18.17■□□□□ 0.5
IRF3-224ENST00000599680 BEND3Q5T5X7 828 aa18.17■□□□□ 0.5
IRF3-224ENST00000599680 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
IRF3-224ENST00000599680 ADARB2Q9NS39 739 aaKnown RBP18.17■□□□□ 0.5
IRF3-224ENST00000599680 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
IRF3-224ENST00000599680 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
IRF3-224ENST00000599680 YDJCA8MPS7 323 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 ITGA6P23229 1130 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 SRCIN1Q9C0H9 1055 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
IRF3-224ENST00000599680 PSMD14O00487 310 aa18.15■□□□□ 0.5
IRF3-224ENST00000599680 CASP7P55210 303 aa18.15■□□□□ 0.5
IRF3-224ENST00000599680 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
IRF3-224ENST00000599680 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
IRF3-224ENST00000599680 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
IRF3-224ENST00000599680 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.49
IRF3-224ENST00000599680 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
IRF3-224ENST00000599680 H7C1D1 291 aa18.14■□□□□ 0.49
IRF3-224ENST00000599680 GRM8O00222 908 aa18.14■□□□□ 0.49
IRF3-224ENST00000599680 ALDH1L1O75891 902 aa18.14■□□□□ 0.49
IRF3-224ENST00000599680 MINPP1Q9UNW1 487 aa18.14■□□□□ 0.49
IRF3-224ENST00000599680 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
IRF3-224ENST00000599680 CSF1RP07333 972 aa18.13■□□□□ 0.49
IRF3-224ENST00000599680 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
IRF3-224ENST00000599680 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
IRF3-224ENST00000599680 CNOT7Q9UIV1 285 aaKnown RBP18.13■□□□□ 0.49
IRF3-224ENST00000599680 PTPRCP08575 1304 aa18.13■□□□□ 0.49
IRF3-224ENST00000599680 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
IRF3-224ENST00000599680 RPS12P25398 132 aaKnown RBP18.12■□□□□ 0.49
IRF3-224ENST00000599680 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
IRF3-224ENST00000599680 IFIT5Q13325 482 aaKnown RBP18.12■□□□□ 0.49
IRF3-224ENST00000599680 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
IRF3-224ENST00000599680 MICALL2Q8IY33 904 aa18.12■□□□□ 0.49
IRF3-224ENST00000599680 ANKRD2Q9GZV1 360 aa18.12■□□□□ 0.49
IRF3-224ENST00000599680 ZBTB12Q9Y330 459 aaPredicted RBP18.12■□□□□ 0.49
IRF3-224ENST00000599680 KCNJ4P48050 445 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 DPF2Q92785 391 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 MED23Q9ULK4 1368 aa18.11■□□□□ 0.49
IRF3-224ENST00000599680 FOXO4P98177 505 aa18.1■□□□□ 0.49
IRF3-224ENST00000599680 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
IRF3-224ENST00000599680 LMBR1LQ6UX01 489 aa18.1■□□□□ 0.49
IRF3-224ENST00000599680 KCNQ5Q9NR82 932 aa18.1■□□□□ 0.49
IRF3-224ENST00000599680 MKRN1Q9UHC7 482 aaKnown RBP18.1■□□□□ 0.49
IRF3-224ENST00000599680 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
IRF3-224ENST00000599680 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
IRF3-224ENST00000599680 ZNF646O15015 1829 aaPredicted RBP18.09■□□□□ 0.49
IRF3-224ENST00000599680 ZNF804BA4D1E1 1349 aa18.08■□□□□ 0.49
IRF3-224ENST00000599680 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
IRF3-224ENST00000599680 PODNQ7Z5L7 613 aa18.08■□□□□ 0.48
IRF3-224ENST00000599680 TRPM4Q8TD43 1214 aa18.08■□□□□ 0.48
IRF3-224ENST00000599680 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
IRF3-224ENST00000599680 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
IRF3-224ENST00000599680 CHRNDQ07001 517 aa18.07■□□□□ 0.48
IRF3-224ENST00000599680 TBC1D10BQ4KMP7 808 aaPredicted RBP18.07■□□□□ 0.48
IRF3-224ENST00000599680 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
IRF3-224ENST00000599680 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
IRF3-224ENST00000599680 FBXW7Q969H0 707 aa18.07■□□□□ 0.48
IRF3-224ENST00000599680 ABT1Q9ULW3 272 aaKnown RBP18.07■□□□□ 0.48
IRF3-224ENST00000599680 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
IRF3-224ENST00000599680 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
IRF3-224ENST00000599680 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 SAMD7Q7Z3H4 446 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 MIER1Q8N108 512 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 CNNM1Q9NRU3 951 aa18.06■□□□□ 0.48
IRF3-224ENST00000599680 CNTNAP1P78357 1384 aa18.05■□□□□ 0.48
IRF3-224ENST00000599680 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
IRF3-224ENST00000599680 TRAF5O00463 557 aa18.05■□□□□ 0.48
IRF3-224ENST00000599680 HIRAP54198 1017 aaPredicted RBP18.05■□□□□ 0.48
IRF3-224ENST00000599680 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
IRF3-224ENST00000599680 AGBL3Q8NEM8 1001 aa18.05■□□□□ 0.48
IRF3-224ENST00000599680 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
IRF3-224ENST00000599680 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
IRF3-224ENST00000599680 NBPF7P0C2Y1 421 aaPredicted RBP18.04■□□□□ 0.48
IRF3-224ENST00000599680 KIF4BQ2VIQ3 1234 aa18.04■□□□□ 0.48
IRF3-224ENST00000599680 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
IRF3-224ENST00000599680 ZNF594Q96JF6 807 aaPredicted RBP18.04■□□□□ 0.48
IRF3-224ENST00000599680 GLIS2Q9BZE0 524 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms