RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 MYH3P11055 1940 aa27.38■■□□□ 1.97
PNKP-212ENST00000599454 SAMD7Q7Z3H4 446 aa27.38■■□□□ 1.97
PNKP-212ENST00000599454 USP48Q86UV5 1035 aa27.38■■□□□ 1.97
PNKP-212ENST00000599454 CCDC191Q8NCU4 936 aa27.38■■□□□ 1.97
PNKP-212ENST00000599454 ZC3H12CQ9C0D7 883 aaKnown RBP27.38■■□□□ 1.97
PNKP-212ENST00000599454 PRKRIP1Q9H875 184 aaPredicted RBP27.38■■□□□ 1.97
PNKP-212ENST00000599454 RTL9Q8NET4 1388 aa27.36■■□□□ 1.97
PNKP-212ENST00000599454 NOGQ13253 232 aa27.36■■□□□ 1.97
PNKP-212ENST00000599454 CCDC152Q4G0S7 254 aa27.36■■□□□ 1.97
PNKP-212ENST00000599454 TBC1D10BQ4KMP7 808 aaPredicted RBP27.36■■□□□ 1.97
PNKP-212ENST00000599454 KRT26Q7Z3Y9 468 aa27.36■■□□□ 1.97
PNKP-212ENST00000599454 PHAXQ9H814 394 aaKnown RBP27.36■■□□□ 1.97
PNKP-212ENST00000599454 APAF1O14727 1248 aa27.35■■□□□ 1.97
PNKP-212ENST00000599454 PCCAP05165 728 aaPredicted RBP27.35■■□□□ 1.97
PNKP-212ENST00000599454 DOK7Q18PE1 504 aa27.35■■□□□ 1.97
PNKP-212ENST00000599454 MYD88Q99836 296 aa27.35■■□□□ 1.97
PNKP-212ENST00000599454 HUNKP57058 714 aa27.34■■□□□ 1.97
PNKP-212ENST00000599454 DCPSQ96C86 337 aaKnown RBP27.34■■□□□ 1.97
PNKP-212ENST00000599454 AKAP11Q9UKA4 1901 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 ZNF609O15014 1411 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 PDE8AO60658 829 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 DDX58O95786 925 aaKnown RBP27.33■■□□□ 1.97
PNKP-212ENST00000599454 VIL1P09327 827 aaKnown RBP27.33■■□□□ 1.97
PNKP-212ENST00000599454 SEC31BQ9NQW1 1179 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 KCNQ5Q9NR82 932 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 CWC25Q9NXE8 425 aaPredicted RBP27.33■■□□□ 1.97
PNKP-212ENST00000599454 ANKIB1Q9P2G1 1089 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 TSKSQ9UJT2 592 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 GGA1Q9UJY5 639 aa27.33■■□□□ 1.97
PNKP-212ENST00000599454 G3V3G9 751 aa27.32■■□□□ 1.96
PNKP-212ENST00000599454 ELL2O00472 640 aaPredicted RBP27.32■■□□□ 1.96
PNKP-212ENST00000599454 UFL1O94874 794 aa27.32■■□□□ 1.96
PNKP-212ENST00000599454 DCAF8Q5TAQ9 597 aa27.32■■□□□ 1.96
PNKP-212ENST00000599454 CCDC30Q5VVM6 783 aa27.32■■□□□ 1.96
PNKP-212ENST00000599454 METTL22Q9BUU2 404 aaPredicted RBP27.32■■□□□ 1.96
PNKP-212ENST00000599454 EGFRP00533 1210 aa27.31■■□□□ 1.96
PNKP-212ENST00000599454 KIF4BQ2VIQ3 1234 aa27.31■■□□□ 1.96
PNKP-212ENST00000599454 C2orf69Q8N8R5 385 aa27.31■■□□□ 1.96
PNKP-212ENST00000599454 GBA2Q9HCG7 927 aaPredicted RBP27.31■■□□□ 1.96
PNKP-212ENST00000599454 RBM26Q5T8P6 1007 aaKnown RBP27.3■■□□□ 1.96
PNKP-212ENST00000599454 RGMBQ6NW40 437 aa27.3■■□□□ 1.96
PNKP-212ENST00000599454 C8orf58Q8NAV2 365 aa27.29■■□□□ 1.96
PNKP-212ENST00000599454 SPEF2Q9C093 1822 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 XDHP47989 1333 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 ANKRD18AQ8IVF6 992 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 SULF1Q8IWU6 871 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 AGBL3Q8NEM8 1001 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 CCDC102AQ96A19 550 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 CACNA1FO60840 1977 aa27.28■■□□□ 1.96
PNKP-212ENST00000599454 ADM5C9JUS6 153 aa27.27■■□□□ 1.96
PNKP-212ENST00000599454 CCDC85CA6NKD9 419 aa27.26■■□□□ 1.95
PNKP-212ENST00000599454 ZNF280AP59817 542 aaPredicted RBP27.26■■□□□ 1.95
PNKP-212ENST00000599454 RSBN1LQ6PCB5 846 aaPredicted RBP27.26■■□□□ 1.95
PNKP-212ENST00000599454 DLK2Q6UY11 383 aa27.26■■□□□ 1.95
PNKP-212ENST00000599454 GGA3Q9NZ52 723 aa27.26■■□□□ 1.95
PNKP-212ENST00000599454 ATP2B4P23634 1241 aa27.25■■□□□ 1.95
PNKP-212ENST00000599454 CDC5LQ99459 802 aaKnown RBP27.25■■□□□ 1.95
PNKP-212ENST00000599454 FAM155AB1AL88 458 aaPredicted RBP27.24■■□□□ 1.95
PNKP-212ENST00000599454 KSR2Q6VAB6 950 aa27.24■■□□□ 1.95
PNKP-212ENST00000599454 CCDC85AQ96PX6 553 aaPredicted RBP27.24■■□□□ 1.95
PNKP-212ENST00000599454 ZIC5Q96T25 663 aa27.24■■□□□ 1.95
PNKP-212ENST00000599454 MAP3K2Q9Y2U5 619 aa27.24■■□□□ 1.95
PNKP-212ENST00000599454 PODNQ7Z5L7 613 aa27.23■■□□□ 1.95
PNKP-212ENST00000599454 JARID2Q92833 1246 aaPredicted RBP27.23■■□□□ 1.95
PNKP-212ENST00000599454 MCOLN1Q9GZU1 580 aa27.23■■□□□ 1.95
PNKP-212ENST00000599454 SAGE1Q9NXZ1 904 aa27.23■■□□□ 1.95
PNKP-212ENST00000599454 ZNF157P51786 506 aaPredicted RBP27.22■■□□□ 1.95
PNKP-212ENST00000599454 CTSWP56202 376 aa27.22■■□□□ 1.95
PNKP-212ENST00000599454 NEXNQ0ZGT2 675 aa27.22■■□□□ 1.95
PNKP-212ENST00000599454 RGS19P49795 217 aa27.21■■□□□ 1.95
PNKP-212ENST00000599454 FAM161AQ3B820 660 aa27.21■■□□□ 1.95
PNKP-212ENST00000599454 CDCA5Q96FF9 252 aa27.21■■□□□ 1.95
PNKP-212ENST00000599454 STK31Q9BXU1 1019 aa27.21■■□□□ 1.95
PNKP-212ENST00000599454 PITPNM2Q9BZ72 1349 aa27.2■■□□□ 1.95
PNKP-212ENST00000599454 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.95
PNKP-212ENST00000599454 PI4KAP2A4QPH2 592 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 USP17L3A6NCW0 530 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 USP17L4A6NCW7 530 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 USP17L8P0C7I0 530 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 USP17L1Q7RTZ2 530 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 TSPYL6Q8N831 410 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 PI4KAP1Q8N8J0 262 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 GMLQ99445 158 aa27.2■■□□□ 1.94
PNKP-212ENST00000599454 ZNF646O15015 1829 aaPredicted RBP27.19■■□□□ 1.94
PNKP-212ENST00000599454 IGKV5-2P06315 115 aa27.19■■□□□ 1.94
PNKP-212ENST00000599454 KIF23Q02241 960 aaPredicted RBP27.19■■□□□ 1.94
PNKP-212ENST00000599454 SCARF1Q14162 830 aa27.19■■□□□ 1.94
PNKP-212ENST00000599454 TTLL11Q8NHH1 800 aa27.19■■□□□ 1.94
PNKP-212ENST00000599454 BSDC1Q9NW68 430 aaPredicted RBP27.19■■□□□ 1.94
PNKP-212ENST00000599454 MED23Q9ULK4 1368 aa27.19■■□□□ 1.94
PNKP-212ENST00000599454 ASTN2O75129 1339 aaPredicted RBP27.18■■□□□ 1.94
PNKP-212ENST00000599454 SLC10A3P09131 477 aa27.18■■□□□ 1.94
PNKP-212ENST00000599454 FKBP1BP68106 108 aa27.18■■□□□ 1.94
PNKP-212ENST00000599454 MLLT1Q03111 559 aaPredicted RBP27.18■■□□□ 1.94
PNKP-212ENST00000599454 DGKZQ13574 1117 aa27.18■■□□□ 1.94
PNKP-212ENST00000599454 ANGEL2Q5VTE6 544 aaKnown RBP27.18■■□□□ 1.94
PNKP-212ENST00000599454 MYOZ2Q9NPC6 264 aa27.18■■□□□ 1.94
PNKP-212ENST00000599454 CCDC27Q2M243 656 aa27.17■■□□□ 1.94
PNKP-212ENST00000599454 REM2Q8IYK8 340 aaPredicted RBP27.17■■□□□ 1.94
PNKP-212ENST00000599454 MINPP1Q9UNW1 487 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms