RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 THSD7BQ9C0I4 1608 aa18.82■□□□□ 0.6
EBI3-202ENST00000599339 HSPA8P11142 646 aaKnown RBP18.81■□□□□ 0.6
EBI3-202ENST00000599339 HIRAP54198 1017 aaPredicted RBP18.81■□□□□ 0.6
EBI3-202ENST00000599339 SAPCD2Q86UD0 394 aa18.81■□□□□ 0.6
EBI3-202ENST00000599339 HHIPL1Q96JK4 782 aa18.81■□□□□ 0.6
EBI3-202ENST00000599339 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
EBI3-202ENST00000599339 ZNF408Q9H9D4 720 aa18.81■□□□□ 0.6
EBI3-202ENST00000599339 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
EBI3-202ENST00000599339 MAP2K2P36507 400 aa18.8■□□□□ 0.6
EBI3-202ENST00000599339 DOK7Q18PE1 504 aa18.8■□□□□ 0.6
EBI3-202ENST00000599339 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
EBI3-202ENST00000599339 GGA1Q9UJY5 639 aa18.8■□□□□ 0.6
EBI3-202ENST00000599339 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 UFL1O94874 794 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 NEXNQ0ZGT2 675 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 KSR2Q6VAB6 950 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 MAP3K2Q9Y2U5 619 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 COL4A1P02462 1669 aa18.79■□□□□ 0.6
EBI3-202ENST00000599339 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
EBI3-202ENST00000599339 SAMD7Q7Z3H4 446 aa18.78■□□□□ 0.6
EBI3-202ENST00000599339 TBC1D10BQ4KMP7 808 aaPredicted RBP18.77■□□□□ 0.6
EBI3-202ENST00000599339 USP48Q86UV5 1035 aa18.77■□□□□ 0.6
EBI3-202ENST00000599339 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
EBI3-202ENST00000599339 DCPSQ96C86 337 aaKnown RBP18.77■□□□□ 0.6
EBI3-202ENST00000599339 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
EBI3-202ENST00000599339 CDC5LQ99459 802 aaKnown RBP18.77■□□□□ 0.6
EBI3-202ENST00000599339 RTL9Q8NET4 1388 aa18.77■□□□□ 0.6
EBI3-202ENST00000599339 XDHP47989 1333 aa18.76■□□□□ 0.59
EBI3-202ENST00000599339 PI4KAP2A4QPH2 592 aa18.76■□□□□ 0.59
EBI3-202ENST00000599339 CA12O43570 354 aa18.76■□□□□ 0.59
EBI3-202ENST00000599339 RBM26Q5T8P6 1007 aaKnown RBP18.76■□□□□ 0.59
EBI3-202ENST00000599339 KRT26Q7Z3Y9 468 aa18.76■□□□□ 0.59
EBI3-202ENST00000599339 PI4KAP1Q8N8J0 262 aa18.76■□□□□ 0.59
EBI3-202ENST00000599339 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
EBI3-202ENST00000599339 TSR2Q969E8 191 aaKnown RBP18.76■□□□□ 0.59
EBI3-202ENST00000599339 AOC2O75106 756 aa18.75■□□□□ 0.59
EBI3-202ENST00000599339 VIL1P09327 827 aaKnown RBP18.75■□□□□ 0.59
EBI3-202ENST00000599339 KCNQ5Q9NR82 932 aa18.75■□□□□ 0.59
EBI3-202ENST00000599339 ATP2B4P23634 1241 aa18.74■□□□□ 0.59
EBI3-202ENST00000599339 CTSWP56202 376 aa18.74■□□□□ 0.59
EBI3-202ENST00000599339 KIF4BQ2VIQ3 1234 aa18.74■□□□□ 0.59
EBI3-202ENST00000599339 TWISTNBQ3B726 338 aaPredicted RBP18.74■□□□□ 0.59
EBI3-202ENST00000599339 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
EBI3-202ENST00000599339 IGKV5-2P06315 115 aa18.73■□□□□ 0.59
EBI3-202ENST00000599339 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
EBI3-202ENST00000599339 HUNKP57058 714 aa18.73■□□□□ 0.59
EBI3-202ENST00000599339 NOGQ13253 232 aa18.73■□□□□ 0.59
EBI3-202ENST00000599339 AGBL3Q8NEM8 1001 aa18.73■□□□□ 0.59
EBI3-202ENST00000599339 IL16Q14005 1332 aa18.73■□□□□ 0.59
EBI3-202ENST00000599339 EGFRP00533 1210 aa18.72■□□□□ 0.59
EBI3-202ENST00000599339 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
EBI3-202ENST00000599339 RSBN1LQ6PCB5 846 aaPredicted RBP18.72■□□□□ 0.59
EBI3-202ENST00000599339 SULF1Q8IWU6 871 aa18.72■□□□□ 0.59
EBI3-202ENST00000599339 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
EBI3-202ENST00000599339 GBA2Q9HCG7 927 aaPredicted RBP18.72■□□□□ 0.59
EBI3-202ENST00000599339 ZNF609O15014 1411 aa18.72■□□□□ 0.59
EBI3-202ENST00000599339 SCN9AQ15858 1988 aa18.72■□□□□ 0.59
EBI3-202ENST00000599339 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.59
EBI3-202ENST00000599339 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
EBI3-202ENST00000599339 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
EBI3-202ENST00000599339 PODNQ7Z5L7 613 aa18.71■□□□□ 0.59
EBI3-202ENST00000599339 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
EBI3-202ENST00000599339 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
EBI3-202ENST00000599339 MYH3P11055 1940 aa18.7■□□□□ 0.58
EBI3-202ENST00000599339 CWF19L2Q2TBE0 894 aaKnown RBP18.7■□□□□ 0.58
EBI3-202ENST00000599339 GGA3Q9NZ52 723 aa18.7■□□□□ 0.58
EBI3-202ENST00000599339 USP17L3A6NCW0 530 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 USP17L4A6NCW7 530 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 IGHMBP2P38935 993 aaKnown RBP18.69■□□□□ 0.58
EBI3-202ENST00000599339 ZNF280AP59817 542 aaPredicted RBP18.69■□□□□ 0.58
EBI3-202ENST00000599339 RGMBQ6NW40 437 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 USP17L1Q7RTZ2 530 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 ABHD8Q96I13 439 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 GREM2Q9H772 168 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 MRS2Q9HD23 443 aa18.69■□□□□ 0.58
EBI3-202ENST00000599339 POLR2AP24928 1970 aaKnown RBP18.69■□□□□ 0.58
EBI3-202ENST00000599339 MED23Q9ULK4 1368 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 PSME4Q14997 1843 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 H7C1W4 665 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 FLIIQ13045 1269 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 G2E3Q7L622 706 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 CCDC102AQ96A19 550 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 TSKSQ9UJT2 592 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
EBI3-202ENST00000599339 ANP32CO43423 234 aa18.67■□□□□ 0.58
EBI3-202ENST00000599339 FKBP5Q13451 457 aaPredicted RBP18.67■□□□□ 0.58
EBI3-202ENST00000599339 DLK2Q6UY11 383 aa18.67■□□□□ 0.58
EBI3-202ENST00000599339 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
EBI3-202ENST00000599339 SCARF1Q14162 830 aa18.66■□□□□ 0.58
EBI3-202ENST00000599339 GCKRQ14397 625 aa18.66■□□□□ 0.58
EBI3-202ENST00000599339 ANGEL2Q5VTE6 544 aaKnown RBP18.66■□□□□ 0.58
EBI3-202ENST00000599339 PLA2G12BQ9BX93 195 aa18.66■□□□□ 0.58
EBI3-202ENST00000599339 MYOZ2Q9NPC6 264 aa18.66■□□□□ 0.58
EBI3-202ENST00000599339 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
EBI3-202ENST00000599339 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms