RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 ECE2O60344 883 aa20.23■□□□□ 0.83
SMG9-208ENST00000598886 G2E3Q7L622 706 aa20.23■□□□□ 0.83
SMG9-208ENST00000598886 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
SMG9-208ENST00000598886 PI4KAP2A4QPH2 592 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 CTCFP49711 727 aaPredicted RBP20.22■□□□□ 0.83
SMG9-208ENST00000598886 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 SAPCD2Q86UD0 394 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 PI4KAP1Q8N8J0 262 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 CAPNS2Q96L46 248 aa20.22■□□□□ 0.83
SMG9-208ENST00000598886 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
SMG9-208ENST00000598886 HSPA8P11142 646 aaKnown RBP20.21■□□□□ 0.83
SMG9-208ENST00000598886 DOK7Q18PE1 504 aa20.21■□□□□ 0.83
SMG9-208ENST00000598886 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
SMG9-208ENST00000598886 CYP4F22Q6NT55 531 aa20.21■□□□□ 0.83
SMG9-208ENST00000598886 EYA3Q99504 573 aa20.21■□□□□ 0.83
SMG9-208ENST00000598886 RPS12P25398 132 aaKnown RBP20.2■□□□□ 0.82
SMG9-208ENST00000598886 TWISTNBQ3B726 338 aaPredicted RBP20.2■□□□□ 0.82
SMG9-208ENST00000598886 SAMD7Q7Z3H4 446 aa20.2■□□□□ 0.82
SMG9-208ENST00000598886 CELF2O95319 508 aaKnown RBP20.19■□□□□ 0.82
SMG9-208ENST00000598886 VIL1P09327 827 aaKnown RBP20.19■□□□□ 0.82
SMG9-208ENST00000598886 HSP90B1P14625 803 aaKnown RBP20.19■□□□□ 0.82
SMG9-208ENST00000598886 CTSWP56202 376 aa20.19■□□□□ 0.82
SMG9-208ENST00000598886 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
SMG9-208ENST00000598886 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
SMG9-208ENST00000598886 HHIPL1Q96JK4 782 aa20.19■□□□□ 0.82
SMG9-208ENST00000598886 CCDC85AQ96PX6 553 aaPredicted RBP20.19■□□□□ 0.82
SMG9-208ENST00000598886 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
SMG9-208ENST00000598886 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
SMG9-208ENST00000598886 WTIPA6NIX2 430 aaPredicted RBP20.18■□□□□ 0.82
SMG9-208ENST00000598886 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 CAPN15O75808 1086 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 UFL1O94874 794 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 LBX1P52954 281 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 TTLL11Q8NHH1 800 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
SMG9-208ENST00000598886 H7C1D1 291 aa20.17■□□□□ 0.82
SMG9-208ENST00000598886 ECE1P42892 770 aa20.17■□□□□ 0.82
SMG9-208ENST00000598886 MAP2K1Q02750 393 aaPredicted RBP20.17■□□□□ 0.82
SMG9-208ENST00000598886 TBC1D10BQ4KMP7 808 aaPredicted RBP20.17■□□□□ 0.82
SMG9-208ENST00000598886 GGA1Q9UJY5 639 aa20.17■□□□□ 0.82
SMG9-208ENST00000598886 XDHP47989 1333 aa20.17■□□□□ 0.82
SMG9-208ENST00000598886 H7C1W4 665 aa20.16■□□□□ 0.82
SMG9-208ENST00000598886 CASP7P55210 303 aa20.16■□□□□ 0.82
SMG9-208ENST00000598886 GMLQ99445 158 aa20.16■□□□□ 0.82
SMG9-208ENST00000598886 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
SMG9-208ENST00000598886 GREM2Q9H772 168 aa20.16■□□□□ 0.82
SMG9-208ENST00000598886 AOC2O75106 756 aa20.15■□□□□ 0.82
SMG9-208ENST00000598886 ZNF280AP59817 542 aaPredicted RBP20.15■□□□□ 0.82
SMG9-208ENST00000598886 USP48Q86UV5 1035 aa20.15■□□□□ 0.82
SMG9-208ENST00000598886 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
SMG9-208ENST00000598886 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
SMG9-208ENST00000598886 ANKIB1Q9P2G1 1089 aa20.15■□□□□ 0.82
SMG9-208ENST00000598886 MED23Q9ULK4 1368 aa20.14■□□□□ 0.81
SMG9-208ENST00000598886 ASTN2O75129 1339 aaPredicted RBP20.14■□□□□ 0.81
SMG9-208ENST00000598886 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
SMG9-208ENST00000598886 MAP2K2P36507 400 aa20.14■□□□□ 0.81
SMG9-208ENST00000598886 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
SMG9-208ENST00000598886 FLIIQ13045 1269 aa20.13■□□□□ 0.81
SMG9-208ENST00000598886 GCKRQ14397 625 aa20.13■□□□□ 0.81
SMG9-208ENST00000598886 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
SMG9-208ENST00000598886 BSDC1Q9NW68 430 aaPredicted RBP20.13■□□□□ 0.81
SMG9-208ENST00000598886 MINPP1Q9UNW1 487 aa20.13■□□□□ 0.81
SMG9-208ENST00000598886 ADM5C9JUS6 153 aa20.12■□□□□ 0.81
SMG9-208ENST00000598886 VAMP4O75379 141 aa20.12■□□□□ 0.81
SMG9-208ENST00000598886 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
SMG9-208ENST00000598886 KIF4BQ2VIQ3 1234 aa20.12■□□□□ 0.81
SMG9-208ENST00000598886 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
SMG9-208ENST00000598886 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
SMG9-208ENST00000598886 CDC5LQ99459 802 aaKnown RBP20.12■□□□□ 0.81
SMG9-208ENST00000598886 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
SMG9-208ENST00000598886 ATP2B4P23634 1241 aa20.11■□□□□ 0.81
SMG9-208ENST00000598886 PAXIP1Q6ZW49 1069 aaPredicted RBP20.11■□□□□ 0.81
SMG9-208ENST00000598886 KRT26Q7Z3Y9 468 aa20.11■□□□□ 0.81
SMG9-208ENST00000598886 WDR63Q8IWG1 891 aa20.11■□□□□ 0.81
SMG9-208ENST00000598886 ZNF408Q9H9D4 720 aa20.11■□□□□ 0.81
SMG9-208ENST00000598886 CSF1RP07333 972 aa20.1■□□□□ 0.81
SMG9-208ENST00000598886 GRM1Q13255 1194 aa20.1■□□□□ 0.81
SMG9-208ENST00000598886 AGBL3Q8NEM8 1001 aa20.1■□□□□ 0.81
SMG9-208ENST00000598886 ZIC5Q96T25 663 aa20.1■□□□□ 0.81
SMG9-208ENST00000598886 GGA3Q9NZ52 723 aa20.1■□□□□ 0.81
SMG9-208ENST00000598886 PAPPA2Q9BXP8 1791 aa20.1■□□□□ 0.81
SMG9-208ENST00000598886 IRS2Q9Y4H2 1338 aa20.09■□□□□ 0.81
SMG9-208ENST00000598886 FAM155AB1AL88 458 aaPredicted RBP20.09■□□□□ 0.81
SMG9-208ENST00000598886 BRPF1P55201 1214 aaPredicted RBP20.09■□□□□ 0.81
SMG9-208ENST00000598886 LINS1Q8NG48 757 aa20.09■□□□□ 0.81
SMG9-208ENST00000598886 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
SMG9-208ENST00000598886 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
SMG9-208ENST00000598886 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.81
SMG9-208ENST00000598886 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.81
SMG9-208ENST00000598886 EXOSC9Q06265 439 aaKnown RBP20.08■□□□□ 0.81
SMG9-208ENST00000598886 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
SMG9-208ENST00000598886 RBM26Q5T8P6 1007 aaKnown RBP20.08■□□□□ 0.81
SMG9-208ENST00000598886 PODNQ7Z5L7 613 aa20.08■□□□□ 0.81
SMG9-208ENST00000598886 TXNRD3Q86VQ6 643 aa20.08■□□□□ 0.81
SMG9-208ENST00000598886 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
SMG9-208ENST00000598886 HUNKP57058 714 aa20.07■□□□□ 0.8
SMG9-208ENST00000598886 FKBP5Q13451 457 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms